RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ZNF852Q6ZMS4 543 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CFAP77Q6ZQR2 320 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CLDN22Q8N7P3 220 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 OR8J2Q8NGG1 315 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 C2orf15Q8WU43 125 aaKnown RBP11.94□□□□□ -0.5
COMMD4-209ENST00000564068 RNF31Q96EP0 1072 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 POT1Q9NUX5 634 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 FKBP14Q9NWM8 211 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 UPB1Q9UBR1 384 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CKLFQ9UBR5 152 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 KCNN3Q9UGI6 736 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 FARSAQ9Y285 508 aaKnown RBP11.94□□□□□ -0.5
COMMD4-209ENST00000564068 PADI2Q9Y2J8 665 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 MED31Q9Y3C7 131 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 MYO7AQ13402 2215 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 TRBV2A0A0J9YWF9 115 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 A0A1B0GVI7 797 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 GABRPO00591 440 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ARPC1BO15143 372 aaKnown RBP11.94□□□□□ -0.5
COMMD4-209ENST00000564068 C1QBP02746 253 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 DDX6P26196 483 aaKnown RBP eCLIP11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CEBPGP53567 150 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 DUSP7Q16829 419 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 PLK5Q496M5 336 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 FCRLBQ6BAA4 426 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ZNF615Q8N8J6 731 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 GLYATL1Q969I3 302 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 SGTBQ96EQ0 304 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 LGR4Q9BXB1 951 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 COPZ2Q9P299 210 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 PSMD9O00233 223 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 CSF3P09919 207 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 PTPN2P17706 415 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 IDSP22304 550 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ACADLP28330 430 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ARFIP1P53367 373 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 RAB40BQ12829 278 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 SYPL1Q16563 259 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 HES5Q5TA89 166 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 FANK1Q8TC84 345 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 TRIB2Q92519 343 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 ALG8Q9BVK2 526 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 B3GNT4Q9C0J1 378 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 SLAMF7Q9NQ25 335 aa11.94□□□□□ -0.5
COMMD4-209ENST00000564068 C1QTNF3-AMACRE9PGA6 284 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 LEFTY1O75610 366 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 RBBP9O75884 186 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PTPN6P29350 595 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 TAS2R43P59537 309 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 GAB1Q13480 694 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 MANEALQ5VSG8 457 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 SLC22A10Q63ZE4 541 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 GID4Q8IVV7 300 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 FOXRED2Q8IWF2 684 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 POGLUT1Q8NBL1 392 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 BBS10Q8TAM1 723 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 RERGQ96A58 199 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 OR2A14Q96R47 310 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 RTP3Q9BQQ7 232 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 COMMD4Q9H0A8 199 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 XKR8Q9H6D3 395 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 MRPS30Q9NP92 439 aaKnown RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PCDHB16Q9NRJ7 776 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 SHANK3Q9BYB0 1731 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 URADA6NGE7 173 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 GRPRP30550 384 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 MGAT3Q09327 533 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 ASAH1Q13510 395 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 TMEM107Q6UX40 140 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 OLIG3Q7RTU3 272 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 MSRB3Q8IXL7 192 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PCDHGB7Q9Y5F8 929 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 NUBP2Q9Y5Y2 271 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 SLC43A1O75387 559 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PRSS23O95084 383 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PRR35P0CG20 571 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 ACVR1Q04771 509 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 SEC23BQ15437 767 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 RPTNQ6XPR3 784 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 HORMAD2Q8N7B1 307 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 OR52E4Q8NGH9 312 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 SORCS1Q8WY21 1168 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PTPRZ1P23471 2315 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-209ENST00000564068 PRNPP04156 253 aa11.92□□□□□ -0.5
COMMD4-209ENST00000564068 TRAPPC2P0DI81 140 aa11.92□□□□□ -0.5
COMMD4-209ENST00000564068 TRAPPC2BP0DI82 140 aa11.92□□□□□ -0.5
COMMD4-209ENST00000564068 GTF2F2P13984 249 aa11.92□□□□□ -0.5
COMMD4-209ENST00000564068 ZNF30P17039 623 aa11.92□□□□□ -0.5
COMMD4-209ENST00000564068 CFL1P23528 166 aaKnown RBP11.92□□□□□ -0.5
COMMD4-209ENST00000564068 KIR2DL3P43628 341 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms