RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PLCZ1Q86YW0 608 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 OR9A2Q8NGT5 310 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM222BQ8WU58 562 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 TMBIM1Q969X1 311 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 SERHLQ9NQF3 203 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 GIMAP4Q9NUV9 329 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 DNAJB12Q9NXW2 375 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 KLRF1Q9NZS2 232 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 CRIM1Q9NZV1 1036 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 EMCNQ9ULC0 261 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 TIMM22Q9Y584 194 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 MYO1GB0I1T2 1018 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 G3V2L1 256 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 GOLGA8RI6L899 631 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 UBFD1O14562 309 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ERN1O75460 977 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 SLITRK5O94991 958 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 DDCP20711 480 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 CTSSP25774 331 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 SRD5A2P31213 254 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 UQCRC1P31930 480 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 OPRM1P35372 400 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 PNLIPRP2P54317 469 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 GFRA1P56159 465 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 EFR3AQ14156 821 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 RCAN2Q14206 197 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ERCC6LQ2NKX8 1250 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 FLYWCH1Q4VC44 716 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ENPP6Q6UWR7 440 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 TRIM46Q7Z4K8 759 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ZZZ3Q8IYH5 903 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 EIF1ADQ8N9N8 165 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM76AQ8TAV0 307 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 KAT2AQ92830 837 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 EXOSC8Q96B26 276 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 DTNBP1Q96EV8 351 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ZFP3Q96NJ6 502 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 KCNA7Q96RP8 456 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 TRIB1Q96RU8 372 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 CXXC4Q9H2H0 198 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 ANKRA2Q9H9E1 313 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 RASSF1Q9NS23 344 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 WIF1Q9Y5W5 379 aa15.66■□□□□ 0.1
VPS9D1-203ENST00000563798 A0A087WV62 115 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 C2orf72A6NCS6 295 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 GLRA3O75311 464 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 REM1O75628 298 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 ANXA4P09525 319 aaPredicted RBP15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 GAS1P54826 345 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 CORO7P57737 925 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 SORDQ00796 357 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 NPSR1Q6W5P4 371 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 ZYG11AQ6WRX3 759 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM9CQ8IZT9 166 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 OR7G2Q8NG99 324 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 METTL2AQ96IZ6 378 aaKnown RBP15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 FOXC2Q99958 501 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 POLDIP3Q9BY77 421 aaKnown RBP15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 FOLH1BQ9HBA9 442 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 MID1IP1Q9NPA3 183 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 PFDN4Q9NQP4 134 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 TAS2R9Q9NYW1 312 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 GRID1Q9ULK0 1009 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 MAPRE3Q9UPY8 281 aa15.65■□□□□ 0.1
VPS9D1-203ENST00000563798 A6NNC1 897 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 NPIPB8E9PQR5 432 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 PLOD2O00469 737 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 PSMG1O95456 288 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 IFI6P09912 130 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 CYP4B1P13584 511 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 SLCO1A2P46721 670 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 ART1P52961 327 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 IST1P53990 364 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 FOXA1P55317 472 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 DNAJB13P59910 316 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 MRPS22P82650 360 aaKnown RBP15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 PSG6Q00889 435 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 ZNF763Q0D2J5 394 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 FAM71E1Q6IPT2 247 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 FRMD7Q6ZUT3 714 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 KIF18BQ86Y91 864 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 TRIM42Q8IWZ5 723 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 C9orf106Q8NAJ2 232 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 WNT2BQ93097 391 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 ADOQ96SZ5 270 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 TM9SF2Q99805 663 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 TUBA1CQ9BQE3 449 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 G6PC3Q9BUM1 346 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 MYNNQ9NPC7 610 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 TAS2R10Q9NYW0 307 aa15.64■□□□□ 0.09
VPS9D1-203ENST00000563798 MED13LQ71F56 2210 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 A0A1W2PPM1 405 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 RCBTB2O95199 551 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 GOSR1O95249 250 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 PROCP04070 461 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 MYL2P10916 166 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CHMP24386 653 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 KRT20P35900 424 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 LHX2P50458 406 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 EEF1A1P68104 462 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms