RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 GSN-AS1Q9NRJ2 163 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZDHHC18Q9NUE0 388 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC38A7Q9NVC3 462 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF346Q9UL40 294 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 VANGL2Q9ULK5 521 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 OAZ3Q9UMX2 235 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 GINS2Q9Y248 185 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RAP2CQ9Y3L5 183 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CBY1Q9Y3M2 126 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 INSL6Q9Y581 213 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 IGSF9BQ9UPX0 1349 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 HYKKA2RU49 373 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 M0R296 226 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 HDAC3O15379 428 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 NBR2O15453 112 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 KCNN4O15554 427 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC37A4O43826 429 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CALUO43852 315 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CDK14O94921 469 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MT-CO3P00414 261 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 FTH1P02794 183 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 FOSL2P15408 326 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TSPAN8P19075 237 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CR2P20023 1033 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SRD5A2P31213 254 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RPL9P32969 192 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RPL21P46778 160 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RARRES1P49788 294 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RAB9AP51151 201 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ARHGDIAP52565 204 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 NDST2P52849 883 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 PGGT1BP53609 377 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CDH4P55283 916 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RGS8P57771 180 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 NXPH1P58417 271 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 PPIAP62937 165 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 DLX2Q07687 328 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ITGB3BPQ13352 177 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 EXOSC2Q13868 293 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RCAN2Q14206 197 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CTTNQ14247 550 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 EMC2Q15006 297 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 EFHC1Q5JVL4 640 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LIPNQ5VXI9 398 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LIPJQ5W064 366 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TWF2Q6IBS0 349 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TCTN3Q6NUS6 607 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SASS6Q6UVJ0 657 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RHOUQ7L0Q8 258 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TRMT1LQ7Z2T5 733 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 KBTBD2Q8IY47 623 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM83FQ8NEG4 500 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 OR4A15Q8NGL6 344 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 OR1L4Q8NGR5 311 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 OR4L1Q8NH43 312 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ARRDC2Q8TBH0 407 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LRRC20Q8TCA0 184 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SCARB1Q8WTV0 552 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SPRYD4Q8WW59 207 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC44A1Q8WWI5 657 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 HAS1Q92839 578 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CIPCQ9C0C6 399 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ACTL8Q9H568 366 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 DHX33Q9H6R0 707 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 Q9H8V8 135 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SMOXQ9NWM0 555 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 GAR1Q9NY12 217 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 C1RLQ9NZP8 487 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RCC2Q9P258 522 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF639Q9UID6 485 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TTC7AQ9ULT0 858 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CA5BQ9Y2D0 317 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 NOX1Q9Y5S8 564 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 COL11A1P12107 1806 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 OR2M5A3KFT3 312 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 OTOL1A6NHN0 477 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 B8ZZF3 427 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM90A26D6RGX4 464 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CCL24O00175 119 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 NR5A2O00482 541 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 BCKDKO14874 412 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CLN5O75503 358 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CRTAPO75718 401 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CST1P01037 141 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CRYGBP07316 175 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ACAA1P09110 424 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF286BP0CG31 522 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 DBTP11182 482 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 NT5EP21589 574 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 LAP3P28838 519 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CSTF2P33240 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 DUTP33316 252 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CD80P33681 288 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CNR2P34972 360 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 SLURP1P55000 103 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms