RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 A0A1W2PR48 441 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 C5orf60A6NFR6 353 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 MBD3L5A6NJ08 208 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 SHISA8B8ZZ34 492 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PPIAL4DF5H284 164 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 J3QL48 77 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PTGESO14684 152 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ITGA10O75578 1167 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ITGB2P05107 769 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 UBCP0CG48 685 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 GOT1P17174 413 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 GABRA5P31644 462 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 SMCPP49901 116 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 FGF8P55075 233 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 PKNOX1P55347 436 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 AP1S2P56377 157 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PCBP4P57723 403 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 PITPNAQ00169 270 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 CHRNEQ04844 493 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 GABPAQ06546 454 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ACOX1Q15067 660 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 EFNB3Q15768 340 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 IMPG1Q17R60 797 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ALS2CLQ60I27 953 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 TMEM107Q6UX40 140 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 Q6ZPB1 254 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 C2orf73Q8N5S3 287 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 BHLHE22Q8NFJ8 381 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 OR2L5Q8NG80 312 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PIWIL2Q8TC59 973 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 TMEM171Q8WVE6 324 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ST8SIA2Q92186 375 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 CCDC120Q96HB5 630 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ZNF385AQ96PM9 386 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 ZNF251Q9BRH9 671 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PAAF1Q9BRP4 392 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ACTL8Q9H568 366 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 MYNNQ9NPC7 610 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 EQTNQ9NQ60 294 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 DNAJB12Q9NXW2 375 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 GAR1Q9NY12 217 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 IL17BQ9UHF5 180 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 RWDD2AQ9UIY3 292 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 OR10H1Q9Y4A9 318 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 LOC100289279A0A1B0GTE1 492 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 TCRBV7S2A1N4TA0A589 114 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 FGF10O15520 208 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 LCMT2O60294 686 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 ATP6V1G2O95670 118 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PEX11BO96011 259 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 CYBBP04839 570 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 CRHP06850 196 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 GSTA1P08263 222 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 OCMP0CE72 109 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 HLA-GP17693 338 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 RFX5P48382 616 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 HCAR3P49019 387 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 RAG2P55895 527 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 LCN2P80188 198 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PRKCQQ04759 706 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 GK3PQ14409 553 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 TAF13Q15543 124 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 HLFQ16534 295 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 KCTD19Q17RG1 926 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 SLC8B1Q6J4K2 584 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ZNF562Q6V9R5 426 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 RNF207Q6ZRF8 634 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 MRPL21Q7Z2W9 205 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 SFR1Q86XK3 245 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 IGDCC3Q8IVU1 814 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 CMTM8Q8IZV2 173 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ZCCHC9Q8N567 271 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 SMG8Q8ND04 991 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 PAPD5Q8NDF8 572 aaKnown RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 CHDHQ8NE62 594 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 OR2V1Q8NHB1 315 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 MAFIPQ8WZ33 124 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 HRASLS5Q96KN8 279 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 Q96M66 194 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 PPP1R2P1Q96PQ5 205 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ACOX2Q99424 681 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 LGMNQ99538 433 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 SLC30A2Q9BRI3 323 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 SYT11Q9BT88 431 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 AMNQ9BXJ7 453 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 ALX4Q9H161 411 aaPredicted RBP4.45□□□□□ -1.7
SMG1-207ENST00000563235 NARFLQ9H6Q4 476 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 UGT1A10Q9HAW8 530 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 IFT46Q9NQC8 304 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 RNF146Q9NTX7 359 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 KIAA1456Q9P272 454 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ST3GAL5Q9UNP4 418 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 ADGRB1O14514 1584 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 FAM187AA6NFU0 413 aa4.45□□□□□ -1.7
SMG1-207ENST00000563235 A8MUA0 341 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms