RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SPACA6W5XKT8 324 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CLDN24A6NM45 220 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 SDC3O75056 442 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 TP53P04637 393 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ATP1B1P05026 303 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 LCKP06239 509 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ZNF182P17025 639 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 CAPZBP47756 277 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 SMIM11AP58511 58 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 RACK1P63244 317 aaKnown RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 HOXC5Q00444 222 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 TARDBPQ13148 414 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 EXOSC7Q15024 291 aaKnown RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 TYW3Q6IPR3 259 aaKnown RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 DGAT2L6Q6ZPD8 337 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 IQCHQ86VS3 1027 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 MORN4Q8NDC4 146 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 OR4K5Q8NGD3 323 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 OR52P1PQ8NH57 321 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ANKRD9Q96BM1 317 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 GPA33Q99795 319 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 FKBP14Q9NWM8 211 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 GPR83Q9NYM4 423 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ENOPH1Q9UHY7 261 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ENPP5Q9UJA9 477 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 CLCA2Q9UQC9 943 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 NTNG1Q9Y2I2 539 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 DUXAA6NLW8 204 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 SYT5O00445 386 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 PROS1P07225 676 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 MMP11P24347 488 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 PSMB9P28065 219 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 STT3AP46977 705 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 AVPR1BP47901 424 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 CDC42P60953 191 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 HPCAP84074 193 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 MGAT2Q10469 447 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 PRICKLE4Q2TBC4 344 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 DEFB133Q30KQ1 61 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 ZER1Q7Z7L7 766 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 MEX3DQ86XN8 651 aaKnown RBP17.86■□□□□ 0.45
SMPD3-203ENST00000563226 GKN2Q86XP6 184 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 TANKQ92844 425 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 TIMMDC1Q9NPL8 285 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 MAT2BQ9NZL9 334 aa17.86■□□□□ 0.45
SMPD3-203ENST00000563226 A0A0A6YYC8 382 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 CPSF4LA6NMK7 179 aaKnown RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 CLCA1A8K7I4 914 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 I3L1I5 382 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 TRHRP34981 398 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 RAB38P57729 211 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 CSNK2BP67870 215 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 ILKQ13418 452 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 PRTGQ2VWP7 1150 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 ARHGAP11BQ3KRB8 267 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 SYT6Q5T7P8 510 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 SVOPQ8N4V2 548 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 CADM4Q8NFZ8 388 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 POLR2J3Q9H1A7 115 aaKnown RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 GPN2Q9H9Y4 310 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 ANKHQ9HCJ1 492 aa17.85■□□□□ 0.45
SMPD3-203ENST00000563226 COLQQ9Y215 455 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-203ENST00000563226 CHST10O43529 356 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 MRPS14O60783 128 aaKnown RBP17.84■□□□□ 0.45
SMPD3-203ENST00000563226 BCKDHBP21953 392 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 GFERP55789 205 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SPCS2Q15005 226 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 CTF1Q16619 201 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 INAVAQ3KP66 663 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 EXOSC6Q5RKV6 272 aaKnown RBP17.84■□□□□ 0.45
SMPD3-203ENST00000563226 ANKRD13BQ86YJ7 626 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 PIK3R3Q92569 461 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 YIPF6Q96EC8 236 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SDF2Q99470 211 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SLC38A3Q99624 504 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SEMA4GQ9NTN9 838 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 FBXO34Q9NWN3 711 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 UCKL1Q9NWZ5 548 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 HCN3Q9P1Z3 774 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 ZNF443Q9Y2A4 671 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-203ENST00000563226 WDR45Q9Y484 360 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 H3BN98 237 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 BCAS1O75363 584 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SLITRK5O94991 958 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 CDK1P06493 297 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 PRKAR1BP31321 381 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 TAS2R41P59536 307 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 TEKQ02763 1124 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 PUS10Q3MIT2 529 aaKnown RBP17.84■□□□□ 0.45
SMPD3-203ENST00000563226 DHRS4L2Q6PKH6 230 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 PTCHD4Q6ZW05 846 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 ZBTB46Q86UZ6 589 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 C1orf216Q8TAB5 229 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 WNT16Q9UBV4 365 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 SLC13A4Q9UKG4 626 aa17.84■□□□□ 0.45
SMPD3-203ENST00000563226 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 AQP9O43315 295 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 FOXS1O43638 330 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 PLOD3O60568 738 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 STSP08842 583 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms