RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.3■□□□□ 0.2
CMTM3-204ENST00000562357 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 SLC35A4Q96G79 324 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 NODALQ96S42 347 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 ADOQ96SZ5 270 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 MRTO4Q9UKD2 239 aaKnown RBP16.3■□□□□ 0.2
CMTM3-204ENST00000562357 DNAJC15Q9Y5T4 150 aa16.3■□□□□ 0.2
CMTM3-204ENST00000562357 CACNA1DQ01668 2161 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 SNPHO15079 494 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 PDPK1O15530 556 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 ICOSLGO75144 302 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 CT45A8P0DMV1 189 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 CT45A9P0DMV2 189 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 GLI4P10075 376 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 GPC1P35052 558 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 SOX18P35713 384 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 ASMTP46597 345 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 KIAA0040Q15053 153 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 CT45A2Q5DJT8 189 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 CCDC71Q8IV32 467 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-204ENST00000562357 AGR3Q8TD06 166 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 GFM2Q969S9 779 aaKnown RBP16.29■□□□□ 0.2
CMTM3-204ENST00000562357 PPP3R2Q96LZ3 170 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 AMDHD1Q96NU7 426 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 TSSK3Q96PN8 268 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 UBQLN3Q9H347 655 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 GLIPR2Q9H4G4 154 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 GALNT9Q9HCQ5 603 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 C19orf53Q9UNZ5 99 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-204ENST00000562357 MAPRE3Q9UPY8 281 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 FAM215AQ9Y5M1 114 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
CMTM3-204ENST00000562357 AHRRA9YTQ3 701 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 C19orf84I3L1E1 186 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 PLOD2O00469 737 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 CTIFO43310 598 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 CBR3O75828 277 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 PTPN6P29350 595 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 ZFP36L2P47974 494 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 PNLIPRP2P54317 469 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 PSMD4P55036 377 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 HSPB3Q12988 150 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 DECR1Q16698 335 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 CYP27C1Q4G0S4 372 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 FNDC7Q5VTL7 733 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 MEX3BQ6ZN04 569 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 Q6ZSR9 355 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 ZCCHC23Q6ZST2 131 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 R3HCC1LQ7Z5L2 792 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 CROCCP2Q86T23 111 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 OR2T11Q8NH01 316 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 ZBED6CLQ96FA7 236 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 ZNF764Q96H86 408 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 EGLN2Q96KS0 407 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 SPOCK3Q9BQ16 436 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 TUBB1Q9H4B7 451 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 REEP4Q9H6H4 257 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 C3orf14Q9HBI5 128 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 Q9N2J8 555 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 SH3BP4Q9P0V3 963 aa16.28■□□□□ 0.2
CMTM3-204ENST00000562357 EXO1Q9UQ84 846 aaKnown RBP16.28■□□□□ 0.2
CMTM3-204ENST00000562357 TTC36A6NLP5 189 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 ESPNB1AK53 854 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 PIP5K1BO14986 540 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 AKAP10O43572 662 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 TSPAN2O60636 221 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 NME6O75414 186 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 BPGMP07738 259 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 IFI6P09912 130 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 MYZAPP0CAP1 466 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 SDC1P18827 310 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 TACR1P25103 407 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 SSTR2P30874 369 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 HPCAL1P37235 193 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 RPL3P39023 403 aaKnown RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 CRYZQ08257 329 aaKnown RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 ATP6AP1LQ52LC2 224 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 RFTN2Q52LD8 501 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 DESI1Q6ICB0 168 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 NPSR1Q6W5P4 371 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 NUDCD3Q8IVD9 361 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 OR2L13Q8N349 312 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 OR14L1PQ8NHC6 308 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 EFHD2Q96C19 240 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-204ENST00000562357 ELP4Q96EB1 424 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 FCRL1Q96LA6 429 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 CENPHQ9H3R5 247 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 SERHLQ9NQF3 203 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 CAMK2AQ9UQM7 478 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 WIF1Q9Y5W5 379 aa16.27■□□□□ 0.2
CMTM3-204ENST00000562357 NINQ8N4C6 2090 aa16.26■□□□□ 0.19
CMTM3-204ENST00000562357 NKX2-6A6NCS4 301 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms