RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CENPLQ8N0S6 344 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 FNDC9Q8TBE3 224 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 NEUROG1Q92886 237 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 NTNG2Q96CW9 530 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 LCORQ96JN0 433 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 MARK4Q96L34 752 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 SECISBP2Q96T21 854 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 PIP5K1AQ99755 562 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CPNE1Q99829 537 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 DSN1Q9H410 356 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 NOL11Q9H8H0 719 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 IKBKGQ9Y6K9 419 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 FAM159BA6NKW6 160 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 MSTNO14793 375 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 ZIC3O60481 467 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 FPR1P21462 350 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 GRK2P25098 689 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 DPP4P27487 766 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 SERPINB1P30740 379 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 DEKP35659 375 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 RFX3P48380 749 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 MAPK12P53778 367 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 BIKQ13323 160 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 CAPRIN1Q14444 709 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 PON3Q15166 354 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 TSC22D1Q15714 1073 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 UAP1Q16222 522 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 TCHHL1Q5QJ38 904 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 MROH9Q5TGP6 573 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 NPSR1Q6W5P4 371 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 C3orf62Q6ZUJ4 267 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 PLEKHM3Q6ZWE6 761 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 CHMP1BQ7LBR1 199 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 NUP54Q7Z3B4 507 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 COMMD6Q7Z4G1 85 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 ZNF619Q8N2I2 560 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 OR4K17Q8NGC6 315 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 CDKL2Q92772 493 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 PHF21BQ96EK2 531 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 COL21A1Q96P44 957 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 RTN4RQ9BZR6 473 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 FOLH1BQ9HBA9 442 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 NMRAL1Q9HBL8 299 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 MED11Q9P086 117 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 SLC12A4Q9UP95 1085 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 PCDHGA11Q9Y5H2 935 aa10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 YLPM1P49750 1951 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-202ENST00000561960 UQCRHLA0A096LP55 91 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 H0YIV9 168 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 C16orf97H3BN30 126 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 PPP6CO00743 305 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 HCRTR2O43614 444 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 AQP8O94778 261 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 HK1P19367 917 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 PTNP21246 168 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 IL12BP29460 328 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 SRD5A2P31213 254 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 GALNSP34059 522 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 CDKN1AP38936 164 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC6A8P48029 635 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 EMDP50402 254 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 GAB1Q13480 694 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 CUL3Q13618 768 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 TRADDQ15628 312 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 LGSNQ5TDP6 509 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 LIPJQ5W064 366 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC48A1Q6P1K1 146 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 AAGABQ6PD74 315 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF704Q6ZNC4 412 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 LARP4Q71RC2 724 aaKnown RBP eCLIP10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 CCDC116Q8IYX3 515 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 PTGR2Q8N8N7 351 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 OR7G1Q8NGA0 311 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 OR9A2Q8NGT5 310 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 RAB3IL1Q8TBN0 382 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 FBF1Q8TES7 1133 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 TMEM171Q8WVE6 324 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 EXOSC8Q96B26 276 aaKnown RBP10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 PLPPR2Q96GM1 343 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 ZFP3Q96NJ6 502 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 GSX2Q9BZM3 304 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 YAE1D1Q9NRH1 226 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 FETUBQ9UGM5 382 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 ADGRE2Q9UHX3 823 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 CES1P1Q9UKY3 287 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 LAMP3Q9UQV4 416 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF337Q9Y3M9 751 aa10.52□□□□□ -0.73
NSMCE1-202ENST00000561960 NDUFS7O75251 213 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 GOSR1O95249 250 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CLDN9O95484 217 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 ESRRBO95718 433 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CGAP01215 116 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 SPRP35270 261 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CCNG1P51959 295 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 DMTNQ08495 405 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 FAPQ12884 760 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms