RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CES4AQ5XG92 561 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 TIGD3Q6B0B8 471 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 NUP54Q7Z3B4 507 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 TRIM46Q7Z4K8 759 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 NAXEQ8NCW5 288 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 OR4N2Q8NGD1 307 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 BTBD9Q96Q07 612 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 TIMP4Q99727 224 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 GATA5Q9BWX5 397 aaPredicted RBP23.06■■□□□ 1.28
NME3-202ENST00000561637 LIME1Q9H400 295 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 FOLH1BQ9HBA9 442 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 PRODH2Q9UF12 536 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 KCNN3Q9UGI6 736 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 FIS1Q9Y3D6 152 aa23.06■■□□□ 1.28
NME3-202ENST00000561637 CCDC151A5D8V7 595 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 PRAMEF25A6NGN4 478 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 MYO1GB0I1T2 1018 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 B4DXG7 233 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 SNPHO15079 494 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 TO15178 435 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 ACOX3O15254 700 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 CRCPO75575 148 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 JUNP05412 331 aaKnown RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 NAGAP17050 411 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 DDCP20711 480 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 DLX5P56178 289 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 SNTB1Q13884 538 aaKnown RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 HEPACAMQ14CZ8 416 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 ACSF3Q4G176 576 aaPredicted RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 WDR53Q7Z5U6 358 aaPredicted RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 FAM9CQ8IZT9 166 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 FAM83FQ8NEG4 500 aaPredicted RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 EGLN2Q96KS0 407 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 BBS4Q96RK4 519 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 UGT2B28Q9BY64 529 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 RYDENQ9NUL5 291 aaKnown RBP23.05■■□□□ 1.28
NME3-202ENST00000561637 KLRF1Q9NZS2 232 aa23.05■■□□□ 1.28
NME3-202ENST00000561637 FLNAP21333 2647 aaKnown RBP23.04■■□□□ 1.28
NME3-202ENST00000561637 CDH16O75309 829 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 REM1O75628 298 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 MC3RP41968 323 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 ZFP36L2P47974 494 aaKnown RBP23.04■■□□□ 1.28
NME3-202ENST00000561637 FOXD4Q12950 439 aaPredicted RBP23.04■■□□□ 1.28
NME3-202ENST00000561637 MYBPHQ13203 477 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 LIPMQ5VYY2 423 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 ANKRD26P1Q6NSI1 321 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 WDSUB1Q8N9V3 476 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 CHDHQ8NE62 594 aaPredicted RBP23.04■■□□□ 1.28
NME3-202ENST00000561637 OR2T11Q8NH01 316 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 RDH11Q8TC12 318 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 ADOQ96SZ5 270 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 TUBB1Q9H4B7 451 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 MYNNQ9NPC7 610 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 GIMAP4Q9NUV9 329 aa23.04■■□□□ 1.28
NME3-202ENST00000561637 TMEM233B4DJY2 109 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 TSPAN2O60636 221 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 ERN1O75460 977 aaKnown RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 BMP7P18075 431 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 NCBP2P52298 156 aaKnown RBP eCLIP23.03■■□□□ 1.285e-6■■□□□ 11.5
NME3-202ENST00000561637 DCAF7P61962 342 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 RPP38P78345 283 aaKnown RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 NOXRED1Q6NXP6 359 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 TMEM107Q6UX40 140 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 SLC44A2Q8IWA5 706 aaPredicted RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 TNIP2Q8NFZ5 429 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 OR1J4Q8NGS1 313 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 GFM2Q969S9 779 aaKnown RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 EFHD2Q96C19 240 aaPredicted RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 COL21A1Q96P44 957 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 MECRQ9BV79 373 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 DLL4Q9NR61 685 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 SLC17A7Q9P2U7 560 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 CAMK2AQ9UQM7 478 aa23.03■■□□□ 1.28
NME3-202ENST00000561637 HRNRQ86YZ3 2850 aaPredicted RBP23.03■■□□□ 1.28
NME3-202ENST00000561637 PLOD3O60568 738 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 RSL1D1O76021 490 aaKnown RBP23.02■■□□□ 1.28
NME3-202ENST00000561637 ZWINTO95229 277 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 GABRA1P14867 456 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 PPP2R2AP63151 447 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 ZNF155Q12901 538 aaPredicted RBP23.02■■□□□ 1.28
NME3-202ENST00000561637 KIAA0040Q15053 153 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 ERCC6LQ2NKX8 1250 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 RIPPLY2Q5TAB7 128 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 VASNQ6EMK4 673 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 SLC30A6Q6NXT4 461 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 TMEM81Q6P7N7 255 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 PLXDC2Q6UX71 529 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 RELL2Q8NC24 303 aaPredicted RBP23.02■■□□□ 1.28
NME3-202ENST00000561637 GLIPR2Q9H4G4 154 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 PPCSQ9HAB8 311 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 FLRT3Q9NZU0 649 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 FBXL2Q9UKC9 423 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 FBN3Q75N90 2809 aa23.02■■□□□ 1.28
NME3-202ENST00000561637 SPAG7O75391 227 aa23.01■■□□□ 1.27
NME3-202ENST00000561637 CHRNGP07510 517 aa23.01■■□□□ 1.27
NME3-202ENST00000561637 UROSP10746 265 aa23.01■■□□□ 1.27
NME3-202ENST00000561637 TCEA1P23193 301 aaKnown RBP23.01■■□□□ 1.27
NME3-202ENST00000561637 OR5M10Q6IEU7 315 aa23.01■■□□□ 1.27
NME3-202ENST00000561637 Q6ZSR9 355 aa23.01■■□□□ 1.27
NME3-202ENST00000561637 LARP4Q71RC2 724 aaKnown RBP eCLIP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms