RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 COL21A1Q96P44 957 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 ADOQ96SZ5 270 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 ZBTB18Q99592 522 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 YIPF4Q9BSR8 244 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 DOHHQ9BU89 302 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 DUSP26Q9BV47 211 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 ACSS1Q9NUB1 689 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 SH3BGRL2Q9UJC5 107 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 MRTO4Q9UKD2 239 aaKnown RBP8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 BOKQ9UMX3 212 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 ESPL1Q14674 2120 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 NINQ8N4C6 2090 aa8.3□□□□□ -1.08
SNRPA1-214ENST00000560987 SVILO95425 2214 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 A0A0G2JMM0 328 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 A0A1W2PPB8 328 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 A0A1W2PRS3 328 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 FRG2CA6NGY1 282 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 KIR3DP1A8MWS1 328 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SDHDO14521 159 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ZNHIT1O43257 154 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 LRRTM2O43300 516 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SNX4O95219 450 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 C6orf47O95873 294 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CT45A8P0DMV1 189 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CT45A9P0DMV2 189 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 GDF1P27539 372 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SOAT1P35610 550 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SOX18P35713 384 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CASP3P42574 277 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 PRIM2P49643 509 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CLK3P49761 638 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CDK9P50750 372 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 UFM1P61960 85 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 MRPS22P82650 360 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 PRR5P85299 388 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 HSF1Q00613 529 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SRSF1Q07955 248 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 GAB1Q13480 694 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 TP53BP2Q13625 1128 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 PDE7AQ13946 482 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 EFR3AQ14156 821 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 VPS26BQ4G0F5 336 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 C4orf17Q53FE4 359 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CT45A2Q5DJT8 189 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 TBCELQ5QJ74 424 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ANXA8L1Q5VT79 327 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 OR4F3Q6IEY1 312 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ACAD11Q709F0 780 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 GHDCQ8N2G8 530 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 OR2L13Q8N349 312 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 FBXW8Q8N3Y1 598 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ZFP62Q8NB50 900 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 OR4N2Q8NGD1 307 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 OR1J4Q8NGS1 313 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SPPL2AQ8TCT8 520 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 EFHD2Q96C19 240 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 MAGEB18Q96M61 343 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 RILPQ96NA2 401 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SLX1AQ9BQ83 275 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 TTTY12Q9BZ98 90 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 BHLHE41Q9C0J9 482 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 IL1RL2Q9HB29 575 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 Q9N2J8 555 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SLCO1B3Q9NPD5 702 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ALKBH4Q9NXW9 302 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 ASIC5Q9NY37 505 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 KLRF1Q9NZS2 232 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CNOT11Q9UKZ1 510 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CBLCQ9ULV8 474 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 FAF1Q9UNN5 650 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SLC5A6Q9Y289 635 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 CHCHD2Q9Y6H1 151 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 USH1CQ9Y6N9 552 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 SHANK1Q9Y566 2161 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 MYO18BQ8IUG5 2567 aa8.29□□□□□ -1.08
SNRPA1-214ENST00000560987 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 A0A1B0GTH9 108 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 A0A1B0GUH1 482 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 OR6C70A6NIJ9 312 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 CCL21O00585 134 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 GNB5O14775 395 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 UBDO15205 165 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 ICOSLGO75144 302 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 UGT2B11O75310 529 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 SEMA7AO75326 666 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 KCNH1O95259 989 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 TGDSO95455 350 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 ALOX5P09917 674 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 PTGS2P35354 604 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 FRKP42685 505 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 MAGEA5P43359 124 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 KIR3DL1P43629 444 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 TDGF1P3P51864 188 aa8.28□□□□□ -1.08
SNRPA1-214ENST00000560987 CLNS1AP54105 237 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms