RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 OR7A2PQ8NGA2 310 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 CPT1CQ8TCG5 803 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 KAT2AQ92830 837 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 CIDECQ96AQ7 238 aaPredicted RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 MARK4Q96L34 752 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 VSTM2LQ96N03 204 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 GPR55Q9Y2T6 319 aaPredicted RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 NPFFR2Q9Y5X5 522 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 EMC8O43402 210 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 OR6B1O95007 311 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 PGM1P36871 562 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 PSMD4P55036 377 aaKnown RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 SLC25A3Q00325 362 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 TLE1Q04724 770 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 EXOSC7Q15024 291 aaKnown RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 MAPKAPK3Q16644 382 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 ANKRD26P1Q6NSI1 321 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 IL20RBQ6UXL0 311 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 MSANTD1Q6ZTZ1 278 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF551Q7Z340 670 aaPredicted RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 SNX32Q86XE0 403 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 MIER2Q8N344 545 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 PSD4Q8NDX1 1056 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 PAQR8Q8TEZ7 354 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 MCUR1Q96AQ8 359 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 HHATLQ9HCP6 504 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 Q9N2J8 555 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 ANKRD10Q9NXR5 420 aa12.9□□□□□ -0.34
PKNOX1-209ENST00000560448 SMG1Q96Q15 3661 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC22A3O75751 556 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 P04436 131 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 ABCD3P28288 659 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 KRT20P35900 424 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 PRIM2P49643 509 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 TXNL4AP83876 142 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 DUSP8Q13202 625 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 CYP27C1Q4G0S4 372 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 NUP54Q7Z3B4 507 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 GALNTL5Q7Z4T8 443 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 ARHGAP24Q8N264 748 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 TRIML2Q8N7C3 387 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 AMER2Q8N7J2 671 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 FAR1Q8WVX9 515 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 SNRNP40Q96DI7 357 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 NXF5Q9H1B4 397 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 LIN28AQ9H9Z2 209 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 FOLH1BQ9HBA9 442 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 BTNL2Q9UIR0 455 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 PCDHGB3Q9Y5G1 929 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 KALRNO60229 2985 aa12.89□□□□□ -0.35
PKNOX1-209ENST00000560448 OR6C70A6NIJ9 312 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PPM1BO75688 479 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SNX4O95219 450 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 F10P00742 488 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PGRP06401 933 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CT45A8P0DMV1 189 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CT45A9P0DMV2 189 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CNR1P21554 472 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 LCN1P31025 176 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 S100A3P33764 101 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PSG6Q00889 435 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF155Q12901 538 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SNTA1Q13424 505 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 EFR3AQ14156 821 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SNCBQ16143 134 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 FAM174BQ3ZCQ3 159 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CT45A2Q5DJT8 189 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PGM2L1Q6PCE3 622 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ZFP62Q8NB50 900 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms