RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 NDRG3Q9UGV2 375 aa21.71■■□□□ 1.07
PBX1-217ENST00000559578 PACSIN3Q9UKS6 424 aa21.71■■□□□ 1.07
PBX1-217ENST00000559578 EIF3LQ9Y262 564 aaKnown RBP21.71■■□□□ 1.07
PBX1-217ENST00000559578 WIF1Q9Y5W5 379 aa21.71■■□□□ 1.07
PBX1-217ENST00000559578 CD53P19397 219 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 KRT20P35900 424 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 SERPINB9P50453 376 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 LHX2P50458 406 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 CDH13P55290 713 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 LETMD1Q6P1Q0 360 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 PLXDC2Q6UX71 529 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 RPS27LQ71UM5 84 aaKnown RBP21.7■■□□□ 1.06
PBX1-217ENST00000559578 ZNF675Q8TD23 568 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 ZNF483Q8TF39 744 aaPredicted RBP21.7■■□□□ 1.06
PBX1-217ENST00000559578 SLC35A4Q96G79 324 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 G6PC3Q9BUM1 346 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 MRPL46Q9H2W6 279 aaKnown RBP21.7■■□□□ 1.06
PBX1-217ENST00000559578 VPS29Q9UBQ0 182 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 DKKL1Q9UK85 242 aa21.7■■□□□ 1.06
PBX1-217ENST00000559578 MRPS18CQ9Y3D5 142 aaKnown RBP21.7■■□□□ 1.06
PBX1-217ENST00000559578 PLOD2O00469 737 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 PPP6CO00743 305 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 ADSLP30566 484 aaPredicted RBP21.69■■□□□ 1.06
PBX1-217ENST00000559578 CPOXP36551 454 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 PSPHP78330 225 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 NKX6-1P78426 367 aaPredicted RBP21.69■■□□□ 1.06
PBX1-217ENST00000559578 LTBQ06643 244 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 EFR3AQ14156 821 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 ZNF628Q5EBL2 1059 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 SHEQ5VZ18 495 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 CCDC116Q8IYX3 515 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 GBP7Q8N8V2 638 aaPredicted RBP21.69■■□□□ 1.06
PBX1-217ENST00000559578 ERP27Q96DN0 273 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 BTBD9Q96Q07 612 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 ADOQ96SZ5 270 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 FUT8Q9BYC5 575 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 TRPS1Q9UHF7 1281 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 FBXL2Q9UKC9 423 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 DLGAP4Q9Y2H0 992 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 VPS13CQ709C8 3753 aa21.69■■□□□ 1.06
PBX1-217ENST00000559578 A8MXE2 369 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 INHBBP09529 407 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 ZNF708P17019 499 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 TSPAN8P19075 237 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 IL12BP29460 328 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 CLDN18P56856 261 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 ERCC6LQ2NKX8 1250 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 RELL1Q8IUW5 271 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 SAMD14Q8IZD0 417 aaPredicted RBP21.68■■□□□ 1.06
PBX1-217ENST00000559578 HBEGFQ99075 208 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 PAFAH2Q99487 392 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 C1QTNF3Q9BXJ4 246 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 CDC42EP4Q9H3Q1 356 aaKnown RBP21.68■■□□□ 1.06
PBX1-217ENST00000559578 HEY2Q9UBP5 337 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 MCM8Q9UJA3 840 aa21.68■■□□□ 1.06
PBX1-217ENST00000559578 A0A1W2PPR1 153 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 HSD3B1P14060 373 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 HSD3B2P26439 372 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 OR5M10Q6IEU7 315 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 LARP4Q71RC2 724 aaKnown RBP eCLIP21.67■■□□□ 1.06
PBX1-217ENST00000559578 CHMP1BQ7LBR1 199 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 P4HA3Q7Z4N8 544 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 SMR3AQ99954 134 aa21.67■■□□□ 1.06
PBX1-217ENST00000559578 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 A0A1W2PNV4 684 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 A8MT66 165 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 POC1B-GALNT4F8VUJ3 575 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 MSTNO14793 375 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 ARHGEF9O43307 516 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 TSPAN2O60636 221 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 TNFSF13O75888 250 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 OR4F21O95013 312 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 KRT6AP02538 564 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 KRT6BP04259 564 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 CRHP06850 196 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 CT45A8P0DMV1 189 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 CT45A9P0DMV2 189 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 GRK2P25098 689 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 DPP4P27487 766 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 KRT6CP48668 564 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 PNLIPRP2P54317 469 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 CORO7P57737 925 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 CT45A2Q5DJT8 189 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 OR2A2Q6IF42 318 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 Q71RC1 249 aaPredicted RBP21.66■■□□□ 1.06
PBX1-217ENST00000559578 KAT2AQ92830 837 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 TSPYL1Q9H0U9 437 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 ANKRA2Q9H9E1 313 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 GIMAP4Q9NUV9 329 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 ZNF225Q9UK10 706 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 TESMINQ9Y4I5 508 aa21.66■■□□□ 1.06
PBX1-217ENST00000559578 MANBAO00462 879 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 HCRTR2O43614 444 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 ZIC3O60481 467 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 TGM6O95932 706 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 IL3P08700 152 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 MRPS22P82650 360 aaKnown RBP21.65■■□□□ 1.06
PBX1-217ENST00000559578 CLCQ05315 142 aa21.65■■□□□ 1.06
PBX1-217ENST00000559578 CSTF3Q12996 717 aaKnown RBP21.65■■□□□ 1.06
PBX1-217ENST00000559578 RASA2Q15283 850 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms