RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 A0A1W2PPM1 405 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 MBD3L4A6NDZ8 208 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 MBD3L3A6NE82 208 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 MBD3L5A6NJ08 208 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 CD8B2A6NJW9 211 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 H0Y3Z8 333 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 ACOX3O15254 700 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 RHOXF2BP0C7M4 288 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 TMIGD3P0DMS9 266 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 CYP4B1P13584 511 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 ATP5F1P24539 256 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 CTSSP25774 331 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 RCAN2Q14206 197 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 SPDYAQ5MJ70 313 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 SH2D4BQ5SQS7 431 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 FBXW10Q5XX13 1052 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 LUZP2Q86TE4 346 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 MBD3L2Q8NHZ7 208 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 RHOXF2Q9BQY4 288 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 MID1IP1Q9NPA3 183 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 SLC35C2Q9NQQ7 365 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 ST6GALNAC2Q9UJ37 374 aa18.63■□□□□ 0.57
TSPAN3-206ENST00000559373 TUBAL3A6NHL2 446 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 UBFD1O14562 309 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 TSPAN2O60636 221 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 ERN1O75460 977 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 CBR3O75828 277 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 ACTL6AO96019 429 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 HSD3B1P14060 373 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 HSD3B2P26439 372 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 TIA1P31483 386 aaKnown RBP eCLIP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 PRKAA2P54646 552 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 DCAF7P61962 342 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 C2orf80Q0P641 193 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 SLC29A2Q14542 456 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 IFNEQ86WN2 208 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 SLC44A2Q8IWA5 706 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 GCNT2Q8N0V5 402 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 GOT1L1Q8NHS2 421 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 ZNF675Q8TD23 568 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 TMCO6Q96DC7 493 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 MTBPQ96DY7 904 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 LRRC46Q96FV0 321 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 RMND5BQ96G75 393 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 G6PC3Q9BUM1 346 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 SHCBP1LQ9BZQ2 653 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 C12orf65Q9H3J6 166 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 GSTO2Q9H4Y5 243 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 CALHM2Q9HA72 323 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 TAS2R10Q9NYW0 307 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 SENP1Q9P0U3 644 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 EMCNQ9ULC0 261 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 VPS13CQ709C8 3753 aa18.62■□□□□ 0.57
TSPAN3-206ENST00000559373 FLNAP21333 2647 aaKnown RBP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 OR6C70A6NIJ9 312 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 CLCA1A8K7I4 914 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 TO15178 435 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 CDH16O75309 829 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 JUNP05412 331 aaKnown RBP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 ABHD2P08910 425 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 ANXA4P09525 319 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 DRD2P14416 443 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 IL12BP29460 328 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 LCP2Q13094 533 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 SNTA1Q13424 505 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 POU4F3Q15319 338 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 SF3B4Q15427 424 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 TMEM81Q6P7N7 255 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 LARP4Q71RC2 724 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 PLCZ1Q86YW0 608 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 ZPLD1Q8TCW7 415 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 FAM222BQ8WU58 562 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 INTS12Q96CB8 462 aaKnown RBP18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 L3HYPDHQ96EM0 354 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 VSTM2LQ96N03 204 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 BTBD9Q96Q07 612 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 BBS4Q96RK4 519 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 OR2B2Q9GZK3 357 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 FLRT3Q9NZU0 649 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 WIF1Q9Y5W5 379 aa18.61■□□□□ 0.57
TSPAN3-206ENST00000559373 FAM221AA4D161 298 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 SCO2O43819 266 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 OPRM1P35372 400 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 KRT20P35900 424 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 ZNF155Q12901 538 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 FBXL19-AS1Q494R0 122 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 SPIN4Q56A73 249 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 SLC22A9Q8IVM8 553 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 MZB1Q8WU39 189 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 TNFRSF12AQ9NP84 129 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 GIMAP4Q9NUV9 329 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 FETUBQ9UGM5 382 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 DKKL1Q9UK85 242 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 OR10H1Q9Y4A9 318 aa18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 POLR3HQ9Y535 204 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-206ENST00000559373 NIPBLQ6KC79 2804 aaeCLIP18.59■□□□□ 0.57
TSPAN3-206ENST00000559373 PLOD2O00469 737 aa18.59■□□□□ 0.57
TSPAN3-206ENST00000559373 CPN1P15169 458 aa18.59■□□□□ 0.57
TSPAN3-206ENST00000559373 GRK2P25098 689 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms