RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 EXD2Q9NVH0 621 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 P2RX2Q9UBL9 471 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 FBXL4Q9UKA2 621 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 PCDHGB3Q9Y5G1 929 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 C2orf92A0A1B0GVN3 265 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 A8MVJ9 347 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 CIB2O75838 187 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 GGT1P19440 569 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 DRD5P21918 477 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 GABRA3P34903 492 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 CLCN2P51788 898 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 DCAF7P61962 342 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 RNF4P78317 190 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 CDK6Q00534 326 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 FUT5Q11128 374 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 TRAP1Q12931 704 aaKnown RBP16.75■□□□□ 0.27
CLPX-203ENST00000558958 SCARB2Q14108 478 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 BTBD16Q32M84 506 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 ATAD3BQ5T9A4 648 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 ASPMQ8IZT6 3477 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 METTL25Q8N6Q8 603 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 ZNF441Q8N8Z8 693 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 FAM13CQ8NE31 585 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 NFKBIDQ8NI38 313 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 PIK3R3Q92569 461 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 MUC13Q9H3R2 512 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 ZNF160Q9HCG1 818 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 WDR70Q9NW82 654 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 LIPT1Q9Y234 373 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 SNX13Q9Y5W8 968 aa16.75■□□□□ 0.27
CLPX-203ENST00000558958 CEP295Q9C0D2 2601 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 TRBV11-1A0A0K0K1C0 115 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 TMEM247A6NEH6 219 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 PEX12O00623 359 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 ARPC2O15144 300 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 GSTA4O15217 222 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 TLX3O43711 291 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 PRKNO60260 465 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 NR2F1P10589 423 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 NCK1P16333 377 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 SRSF6Q13247 344 aaKnown RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 ATP1A4Q13733 1029 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 SYPL1Q16563 259 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 REEP3Q6NUK4 255 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 SLC44A2Q8IWA5 706 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 SLC30A8Q8IWU4 369 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 COX18Q8N8Q8 333 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 ANKFN1Q8N957 763 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 CHDHQ8NE62 594 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 C17orf47Q8NEP4 570 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 TMEM19Q96HH6 336 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 LCORQ96JN0 433 aaPredicted RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 GAL3ST4Q96RP7 486 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 BTBD2Q9BX70 525 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 NXF5Q9H1B4 397 aaKnown RBP16.74■□□□□ 0.27
CLPX-203ENST00000558958 ACTR3BQ9P1U1 418 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 MAGEL2Q9UJ55 1249 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 PCSK5Q92824 1860 aa16.74■□□□□ 0.27
CLPX-203ENST00000558958 GXYLT2A0PJZ3 443 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 FRG2CA6NGY1 282 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 CXCR6O00574 342 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 SLC28A2O43868 658 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ZFAND5O76080 213 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 BCHEP06276 602 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ICAM2P13598 275 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 POU6F2P78424 691 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 GNA13Q14344 377 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 NNATQ16517 81 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ARHGAP11BQ3KRB8 267 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 C1orf146Q5VVC0 180 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 HLA-DQA1Q5Y7H0 255 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 GLYATQ6IB77 296 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 C16orf62Q7Z3J2 963 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 PROSER1Q86XN7 944 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ZNF248Q8NDW4 579 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 HIPK4Q8NE63 616 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 OR4N2Q8NGD1 307 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 NUBPLQ8TB37 319 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 WDR60Q8WVS4 1066 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 KCNE4Q8WWG9 221 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 FIG4Q92562 907 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 TRNT1Q96Q11 434 aaKnown RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 GORASP2Q9H8Y8 452 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 Q9N2J8 555 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 DKK4Q9UBT3 224 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ZNF451Q9Y4E5 1061 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 TMEM200CA6NKL6 621 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 C5orf58C9J3I9 102 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 GMNNO75496 209 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 GCM2O75603 506 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 AK1P00568 194 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 CHRM4P08173 479 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 CELA2AP08217 269 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 WT1P19544 449 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 CRISP3P54108 245 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms