RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CASP3P42574 277 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 FRKP42685 505 aaPredicted RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 DNASE1L1P49184 302 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CLDN8P56748 225 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 FBXW4P57775 412 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 C21orf58P58505 322 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 PLCXD2Q0VAA5 305 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 BST1Q10588 318 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 LTB4RQ15722 352 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CT45A2Q5DJT8 189 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CMPK2Q5EBM0 449 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 SLC34A3Q8N130 599 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 LIX1Q8N485 282 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 VPS37AQ8NEZ2 397 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 OR7G2Q8NG99 324 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 OR5M3Q8NGP4 307 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 COQ8BQ96D53 544 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 OMA1Q96E52 524 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 ATP6V1G3Q96LB4 118 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 VSTM2LQ96N03 204 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 COL21A1Q96P44 957 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 SORT1Q99523 831 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 ITPAQ9BY32 194 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 C20orf27Q9GZN8 174 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 DEFB127Q9H1M4 99 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 LDAHQ9H6V9 325 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 FOLH1BQ9HBA9 442 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 Q9N2J8 555 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 ACKR4Q9NPB9 350 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 NTMQ9P121 344 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CNOT11Q9UKZ1 510 aaKnown RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 OR10H1Q9Y4A9 318 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 A0A1B0GTH9 108 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 A0A1B0GVC2 190 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 A0A1W2PRB8 838 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 HMGB1P1B2RPK0 211 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 E9PLN8 166 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 BCKDKO14874 412 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 KLF11O14901 512 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SCAMP2O15127 329 aaKnown RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 HDAC3O15379 428 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 EMC8O43402 210 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 CDC40O60508 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
TPM1-213ENST00000558400 SNNO75324 88 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 TRIM3O75382 744 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 IGHG3P01860 377 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 IL12BP29460 328 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 RFC3P40938 356 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 MC3RP41968 323 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 MASP1P48740 699 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 CLK3P49761 638 aaKnown RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 SMSP52788 366 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PRR5P85299 388 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PSG6Q00889 435 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 DUSP8Q13202 625 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SF3B4Q15427 424 aaKnown RBP eCLIP7.78□□□□□ -1.16
TPM1-213ENST00000558400 PDCD2Q16342 344 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 DECR1Q16698 335 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PRAMEF20Q5VT98 475 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TMEM211Q6ICI0 200 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 BHLHB9Q6PI77 547 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 XKRXQ6PP77 449 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TMEM107Q6UX40 140 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 RPTNQ6XPR3 784 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TMEM64Q6YI46 380 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 ZNF551Q7Z340 670 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 FJX1Q86VR8 437 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SLC44A2Q8IWA5 706 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 TMEM251Q8N6I4 163 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 CDRT4Q8N9R6 151 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 OR52N2Q8NGI0 321 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 FAM57AQ8TBR7 257 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 MGARPQ8TDB4 240 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 OR5P2Q8WZ92 322 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SARAFQ96BY9 339 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SLC35A4Q96G79 324 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TMEM41AQ96HV5 264 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 ZNF597Q96LX8 424 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 JSRP1Q96MG2 331 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 VKORC1Q9BQB6 163 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 TSPAN10Q9H1Z9 355 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 METTL7AQ9H8H3 244 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 ZNF395Q9H8N7 513 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 MEAF6Q9HAF1 191 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PROK2Q9HC23 129 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 SDHAF3Q9NRP4 125 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TUBA8Q9NY65 449 aaPredicted RBP7.78□□□□□ -1.16
TPM1-213ENST00000558400 PCDHGB4Q9UN71 923 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 DTX4Q9Y2E6 619 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 PCDHGB3Q9Y5G1 929 aa7.78□□□□□ -1.16
TPM1-213ENST00000558400 TRGV5A0A0B4J1U4 118 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 PINLYPA6NC86 204 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 G3V3Y1 287 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 TSPAN2O60636 221 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 ICOSLGO75144 302 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 UGT2B11O75310 529 aa7.77□□□□□ -1.17
TPM1-213ENST00000558400 CBR3O75828 277 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms