RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 TMEM89A2RUT3 159 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PRSS44E7EML9 344 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 K7EQD1 137 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 KCNAB3O43448 404 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 DCXO43602 365 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CHMP2AO43633 222 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SMPD2O60906 423 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ANXA9O76027 345 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FGFR1OPO95684 399 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 AK1P00568 194 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RPLP0P05388 317 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 HCKP08631 526 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FCGR3AP08637 254 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PRSS56P0CW18 603 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 MCF2P10911 925 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 HSD17B1P14061 328 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 GLRA1P23415 457 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 GLRA2P23416 452 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PTGER3P43115 390 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 BRCC3P46736 316 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 GYG1P46976 350 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CD151P48509 253 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TRPC1P48995 793 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FNTAP49354 379 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PGFP49763 221 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SMSP52788 366 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FKBP1BP68106 108 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ELAVL2Q12926 359 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 MUC21Q5SSG8 566 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 NCR3LG1Q68D85 454 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 IGFL4Q6B9Z1 124 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FAHD2BQ6P2I3 314 aaPredicted RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 Q6ZRG5 221 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CCDC73Q6ZRK6 1079 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 C18orf65Q6ZTR6 163 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 IL17RELQ6ZVW7 336 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 NLRP9Q7RTR0 991 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 LUZP1Q86V48 1076 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PAQR7Q86WK9 346 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ODF3L1Q8IXM7 274 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SMYD1Q8NB12 490 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 OR13C2Q8NGS9 318 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 MAIP1Q8WWC4 291 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 NEUROG1Q92886 237 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TADA1Q96BN2 335 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CCDC51Q96ER9 411 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SDSLQ96GA7 329 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 FAHD2AQ96GK7 314 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CAPNS2Q96L46 248 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TSNARE1Q96NA8 513 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RAB40CQ96S21 281 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 MCRIP2Q9BUT9 160 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ILKAPQ9H0C8 392 aaPredicted RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ICAM5Q9UMF0 924 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SF3B1O75533 1304 aaKnown RBP eCLIP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CROCC2H7BZ55 1655 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SMIM30A4D0T7 59 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 OR5H15A6NDH6 313 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SRRM3A6NNA2 597 aaPredicted RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 HHLA1C9JL84 531 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 H7C0C1 242 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 P2RX6O15547 441 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ACSL4O60488 711 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SPAG6O75602 509 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 HOXB7P09629 217 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ACP2P11117 423 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ODC1P11926 461 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RNH1P13489 461 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SPRP35270 261 aaPredicted RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 GRIA1P42261 906 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ATP5OP48047 213 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 DHPSP49366 369 aaPredicted RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RND3P61587 244 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 OTUD4Q01804 1114 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RIPPLY1Q0D2K3 151 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ELP6Q0PNE2 266 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SNTB2Q13425 540 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RAPSNQ13702 412 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SQLEQ14534 574 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 KARSQ15046 597 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SLC15A2Q16348 729 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 PDK4Q16654 411 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ECSCRQ19T08 205 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ADPRMQ3LIE5 342 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 CMPK2Q5EBM0 449 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ARMCX5Q6P1M9 558 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 BLOC1S2Q6QNY1 142 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 APOOLQ6UXV4 268 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 LRRC74BQ6ZQY2 392 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 RGS9BPQ6ZS82 235 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TSEN54Q7Z6J9 526 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZFAND4Q86XD8 727 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 UBE2J2Q8N2K1 259 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TMEM178AQ8NBL3 297 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF540Q8NDQ6 660 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 OR1B1Q8NGR6 318 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SCARB1Q8WTV0 552 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 TSEN15Q8WW01 171 aaKnown RBP1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 WBP2Q969T9 261 aa1.17□□□□□ -2.22
CTDSPL2-202ENST00000558373 SLC25A36Q96CQ1 311 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms