RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ACTR3BQ9P1U1 418 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 OR10H1Q9Y4A9 318 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 A0A0G2JPF8 293 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 PRORSD1PA6NEY8 169 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 FRG2CA6NGY1 282 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 ZNF891A8MT65 544 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 HNRNPCL3B7ZW38 293 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 H0YHG0 523 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 MASP2O00187 686 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 HMGN4O00479 90 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 SOCS6O14544 535 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 ABCB7O75027 752 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 HNRNPCL4P0DMR1 293 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 OR12D1P0DN82 309 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 COX6A1P12074 109 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 ETFAP13804 333 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 NAGAP17050 411 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 WT1P19544 449 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 ENDOUP21128 410 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 ATP6V1C1P21283 382 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 SSTR4P31391 388 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 TMED10P49755 219 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 MVDP53602 400 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 POU6F2P78424 691 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 EEF1A2Q05639 463 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 CEACAM7Q14002 265 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 SCARB2Q14108 478 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 EXOSC7Q15024 291 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 PCOLCEQ15113 449 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 FXNQ16595 210 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 DECR1Q16698 335 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 BTBD16Q32M84 506 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 ARHGAP11BQ3KRB8 267 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 TNFAIP8L2Q6P589 184 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 KIRREL2Q6UWL6 708 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 LRRC74BQ6ZQY2 392 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 SLC5A8Q8N695 610 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 TMEM102Q8N9M5 508 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 CHDHQ8NE62 594 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 NFAM1Q8NET5 270 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 PNPT1Q8TCS8 783 aaKnown RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 LZICQ8WZA0 190 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 GATA6Q92908 595 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 IMMP1LQ96LU5 166 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 VSTM2LQ96N03 204 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
TPM1-209ENST00000558072 HOXD1Q9GZZ0 328 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 BCL2L10Q9HD36 194 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 P4HTMQ9NXG6 502 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 IL17BQ9UHF5 180 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 TEKT2Q9UIF3 430 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 RPS6KA6Q9UK32 745 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 SPTBN4Q9H254 2564 aa11.52□□□□□ -0.57
TPM1-209ENST00000558072 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 AQP12BA6NM10 295 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 TO15178 435 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 RRP8O43159 456 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 SLC28A2O43868 658 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 HS6ST1O60243 411 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 STX11O75558 287 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SEC24DO94855 1032 aaPredicted RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 SERPINA7P05543 415 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 UMPSP11172 480 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ETS2P15036 469 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GABRA3P34903 492 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 MAP3K8P41279 467 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 MAN2A2P49641 1150 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GZMMP51124 257 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GPR143P51810 404 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 RNF4P78317 190 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 RPP38P78345 283 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 AIMP2Q13155 320 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 FLOT2Q14254 428 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GPAT3Q53EU6 434 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 EXOSC6Q5RKV6 272 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 BROXQ5VW32 411 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 AP1ARQ63HQ0 302 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 HEPHL1Q6MZM0 1159 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 DGAT2L6Q6ZPD8 337 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 CCDC80Q76M96 950 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 HPS6Q86YV9 775 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 AQP12AQ8IXF9 295 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ZZZ3Q8IYH5 903 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 HORMAD2Q8N7B1 307 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 CLEC1AQ8NC01 280 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 APCDD1LQ8NCL9 501 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SLC22A8Q8TCC7 542 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ELP5Q8TE02 316 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SLC26A7Q8TE54 656 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 NSMCE2Q96MF7 247 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 WDR77Q9BQA1 342 aaPredicted RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 NUDT9Q9BW91 350 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms