RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ANKRA2Q9H9E1 313 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CALHM2Q9HA72 323 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 SLC35C2Q9NQQ7 365 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 FETUBQ9UGM5 382 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 DKKL1Q9UK85 242 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 WIF1Q9Y5W5 379 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 AKAP6Q13023 2319 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 A6NNC1 897 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-235ENST00000557740 PYGBP11216 843 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TACR1P25103 407 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 MPIP34949 423 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 GSTM5P46439 218 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 DGKQP52824 942 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 CORO7P57737 925 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
SHMT2-235ENST00000557740 SRYQ05066 204 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 BTKQ06187 659 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 ZNF763Q0D2J5 394 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 ZNF155Q12901 538 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-235ENST00000557740 IMPG1Q17R60 797 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 SPDYAQ5MJ70 313 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 FBXW10Q5XX13 1052 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 GALNT18Q6P9A2 607 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 LARP4Q71RC2 724 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHMT2-235ENST00000557740 IFNEQ86WN2 208 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 PLCZ1Q86YW0 608 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 WDSUB1Q8N9V3 476 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 ZPLD1Q8TCW7 415 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 NINJ1Q92982 152 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 SLC35A4Q96G79 324 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 VSTM2LQ96N03 204 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 KCNA7Q96RP8 456 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 ADOQ96SZ5 270 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 FOLH1BQ9HBA9 442 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 MID1IP1Q9NPA3 183 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 MIEF1Q9NQG6 463 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 RASSF1Q9NS23 344 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TAS2R10Q9NYW0 307 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TAS2R9Q9NYW1 312 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TBK1Q9UHD2 729 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 EDARQ9UNE0 448 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TIMM22Q9Y584 194 aa13.32□□□□□ -0.28
SHMT2-235ENST00000557740 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 PLOD3O60568 738 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 COQ9O75208 318 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 CRCPO75575 148 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 TMIGD3P0DMS9 266 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-235ENST00000557740 MYL2P10916 166 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 CPN1P15169 458 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 SRD5A2P31213 254 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 AGFG1P52594 562 aaKnown RBP13.31□□□□□ -0.28
SHMT2-235ENST00000557740 IST1P53990 364 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 AAGABQ6PD74 315 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 POMZP3Q6PJE2 187 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 SCIMPQ6UWF3 145 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 NPSR1Q6W5P4 371 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-235ENST00000557740 TRIM42Q8IWZ5 723 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 C9orf106Q8NAJ2 232 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 GOT1L1Q8NHS2 421 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-235ENST00000557740 SFXN2Q96NB2 322 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 TM9SF2Q99805 663 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 TUBA1CQ9BQE3 449 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 RHOXF2Q9BQY4 288 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 STMN4Q9H169 189 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-235ENST00000557740 EPB41L4BQ9H329 900 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 EXPH5Q8NEV8 1989 aa13.31□□□□□ -0.28
SHMT2-235ENST00000557740 GLRA3O75311 464 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 NME6O75414 186 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-235ENST00000557740 IL18BPO95998 194 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 FAM153BP0C7A2 387 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CT45A8P0DMV1 189 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CT45A9P0DMV2 189 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 DDCP20711 480 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 GRK2P25098 689 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 NTSP30990 170 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CPA2P48052 419 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 NCBP2P52298 156 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-235ENST00000557740 NAA20P61599 178 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CEBPEQ15744 281 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 FAM153CQ494X1 144 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CT45A2Q5DJT8 189 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 ZYG11AQ6WRX3 759 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 OR7G2Q8NG99 324 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 EFHD2Q96C19 240 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-235ENST00000557740 ZFP3Q96NJ6 502 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 ACBD3Q9H3P7 528 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CCM2LQ9NUG4 571 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-235ENST00000557740 SIRT5Q9NXA8 310 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 ST6GALNAC2Q9UJ37 374 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms