RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF75CPQ92670 426 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 HPS1Q92902 700 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 COQ8BQ96D53 544 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 BHLHE41Q9C0J9 482 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 TUBA8Q9NY65 449 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 GCN1Q92616 2671 aaKnown RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 A0A0G2JMM0 328 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 A0A1W2PPB8 328 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 A0A1W2PRS3 328 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 KIR3DP1A8MWS1 328 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 G3V3Y1 287 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 EMC8O43402 210 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 REM1O75628 298 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 PSMG1O95456 288 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 KITP10721 976 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 IL12BP29460 328 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 PER3P56645 1201 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 PRR5P85299 388 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 FOXO1Q12778 655 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 EFR3AQ14156 821 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 CYP27C1Q4G0S4 372 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 OGFOD2Q6N063 350 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 LARP4Q71RC2 724 aaKnown RBP eCLIP11.47□□□□□ -0.572e-8■■□□□ 12.5
SLIRP-211ENST00000557623 SPATA19Q7Z5L4 167 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 CAMKMTQ7Z624 323 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 SLC44A2Q8IWA5 706 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 RIMKLAQ8IXN7 391 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 FAM109AQ8N4B1 249 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 PIWIL2Q8TC59 973 aaKnown RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 LRRC8CQ8TDW0 803 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 OR5P2Q8WZ92 322 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 TMBIM1Q969X1 311 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF597Q96LX8 424 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 COL21A1Q96P44 957 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 LMF2Q9BU23 707 aaKnown RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 DPY30Q9C005 99 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 METTL7AQ9H8H3 244 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 Q9N2J8 555 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 NTMQ9P121 344 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 B4GALT7Q9UBV7 327 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 MARCOQ9UEW3 520 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 BAHCC1Q9P281 2608 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 FREM3P0C091 2139 aa11.47□□□□□ -0.57
SLIRP-211ENST00000557623 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-211ENST00000557623 FAM166BA8MTA8 275 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SDHDO14521 159 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CDC40O60508 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SLC19A2O60779 497 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SEMA7AO75326 666 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 LAMP1P11279 417 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ABOP16442 354 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CASP3P42574 277 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 MASP1P48740 699 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CDK9P50750 372 aaKnown RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CLNS1AP54105 237 aaKnown RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 PNLIPRP2P54317 469 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 PSMD4P55036 377 aaKnown RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 DIO3P55073 304 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CORO7P57737 925 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 PSG6Q00889 435 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SNTA1Q13424 505 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SLC10A1Q14973 349 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 VPS26BQ4G0F5 336 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 CMPK2Q5EBM0 449 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SLC30A6Q6NXT4 461 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ZCCHC12Q6PEW1 402 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 NPSR1Q6W5P4 371 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 VASH1Q7L8A9 365 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM251Q8N6I4 163 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 NUP43Q8NFH3 380 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 OR52N2Q8NGI0 321 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SSC4DQ8WTU2 575 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 HGDQ93099 445 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 RELTQ969Z4 430 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 C7orf26Q96N11 449 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms