RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OAS1P00973 400 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PPIAL4GP0DN37 164 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 FGF3P11487 239 aaPredicted RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ANXA3P12429 323 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 MYOGP15173 224 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF44P15621 663 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 NT5EP21589 574 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PCMT1P22061 227 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 EDNRAP25101 427 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PSMA2P25787 234 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 OPRL1P41146 370 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ETV1P50549 477 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ERVFC1-1P60608 527 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ACTR3P61158 418 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 OSTNP61366 133 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 DHODHQ02127 395 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 TEAD2Q15562 447 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CHI3L2Q15782 390 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 FAM189A2Q15884 450 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 UNC50Q53HI1 259 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 C10orf120Q5SQS8 335 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PHYHD1Q5SRE7 291 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 SEL1L3Q68CR1 1132 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 FAM53AQ6NSI3 398 aaPredicted RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 RHBDD2Q6NTF9 364 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LEG1Q6P5S2 330 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 SYT10Q6XYQ8 523 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 Q6ZSR9 355 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 EFL1Q7Z2Z2 1120 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 SMIM29Q86T20 159 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 KIAA1328Q86T90 577 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PARGQ86W56 976 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 TBC1D10CQ8IV04 446 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LSMEM2Q8N112 164 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 OR6C4Q8NGE1 309 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 OR52K1Q8NGK4 314 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 OR1K1Q8NGR3 316 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 NANPQ8TBE9 248 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 EMG1Q92979 244 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LHX4Q969G2 390 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 NT5C3BQ969T7 300 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ADIPOR1Q96A54 375 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LYZL4Q96KX0 146 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CNOT6LQ96LI5 555 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ANKRD27Q96NW4 1050 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 RBM14Q96PK6 669 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CPXM1Q96SM3 734 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 MEIS3Q99687 375 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 RHOJQ9H4E5 214 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 METTL7AQ9H8H3 244 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 MTHFD2LQ9H903 347 aaPredicted RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 GPN2Q9H9Y4 310 aaPredicted RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CRLF2Q9HC73 371 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 APMAPQ9HDC9 416 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 HYPKQ9NX55 129 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 NLGN3Q9NZ94 848 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 BAIAP2L1Q9UHR4 511 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PURGQ9UJV8 347 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 NOSIPQ9Y314 301 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 N6AMT1Q9Y5N5 214 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CSNK1G3Q9Y6M4 447 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CARMIL1Q5VZK9 1371 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 MROH5Q6ZUA9 1318 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 SYNJ2O15056 1496 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CACNA1IQ9P0X4 2223 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 A0A0A6YYD4 124 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 FAM172BPA6NC97 362 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 H0Y8G0 127 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 K7ERI5 159 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CASKO14936 926 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ARPC3O15145 178 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 DUX1O43812 170 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TOXO94900 526 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ECDO95905 644 aaPredicted RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 IGSF6O95976 241 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 PAHP00439 452 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TPM1P09493 284 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 UQCRFS1P1P0C7P4 283 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 PRSS56P0CW18 603 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ADORA3P0DMS8 318 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CD1DP15813 335 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MMP12P39900 470 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 EPS15P42566 896 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MAGEA5P43359 124 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TSFMP43897 325 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 BRCC3P46736 316 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ZRSR1Q15695 479 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 STK11Q15831 433 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ECSCRQ19T08 205 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 EXOC3L2Q2M3D2 409 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF718Q3SXZ3 478 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF672Q499Z4 452 aaPredicted RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CCDC122Q5T0U0 273 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ZSCAN25Q6NSZ9 544 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 HACD2Q6Y1H2 254 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 C16orf62Q7Z3J2 963 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 VSTM4Q8IW00 320 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 APLFQ8IW19 511 aaPredicted RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF683Q8IZ20 524 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms