RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 EMDP50402 254 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 CDH13P55290 713 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 CORO7P57737 925 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 HMGCS1Q01581 520 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 MAP4K2Q12851 820 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 NPSR1Q6W5P4 371 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 P4HA3Q7Z4N8 544 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 PLCZ1Q86YW0 608 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 SPATA4Q8NEY3 305 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 SMPDL3BQ92485 455 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 FIG4Q92562 907 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 WNT2BQ93097 391 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 ISL2Q96A47 359 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 EFHD2Q96C19 240 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-210ENST00000557431 ADOQ96SZ5 270 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 PFDN4Q9NQP4 134 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 XPR1Q9UBH6 696 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 CTIFO43310 598 aaKnown RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 SCO2O43819 266 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 CBR3O75828 277 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ATP1B1P05026 303 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 CHN1P15882 459 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF708P17019 499 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 NAGAP17050 411 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 SRD5A2P31213 254 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 IFT88Q13099 833 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ANKRD34AQ69YU3 496 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 LETMD1Q6P1Q0 360 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF474Q6S9Z5 364 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 BTLAQ7Z6A9 289 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 YTHDF3Q7Z739 585 aaKnown RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 C17orf53Q8N3J3 647 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 C1orf52Q8N6N3 182 aaKnown RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 OR4N2Q8NGD1 307 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 STARD4Q96DR4 205 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 COL21A1Q96P44 957 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 PSD3Q9NYI0 1048 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 FLRT3Q9NZU0 649 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
SLIRP-210ENST00000557431 ANK3Q12955 4377 aaKnown RBP12.74□□□□□ -0.37
SLIRP-210ENST00000557431 FRG2CA6NGY1 282 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SEC14L5O43304 696 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 HCRTR2O43614 444 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ZIC3O60481 467 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 TSPAN2O60636 221 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 OR4F21O95013 312 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 GOSR1O95249 250 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ESRRBO95718 433 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 NID1P14543 1247 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 CSNK2A2P19784 350 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 GRK2P25098 689 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 PPICP45877 212 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SERPINB8P50452 374 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 DIO3P55073 304 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 CLDN15P56746 228 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 STX5Q13190 355 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 NAB1Q13506 487 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 KLC3Q6P597 504 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 PAGE2Q7Z2X7 111 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 PPP1R14CQ8TAE6 165 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SELENOMQ8WWX9 145 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 EXOSC8Q96B26 276 aaKnown RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 PGM2Q96G03 612 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF681Q96N22 645 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 UCN2Q96RP3 112 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 CCL19Q99731 98 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 NTMT1Q9BV86 223 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 PIGMQ9H3S5 423 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ELOVL6Q9H5J4 265 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 ADAM29Q9UKF5 820 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 UTS2RQ9UKP6 389 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 CFL2Q9Y281 166 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 TNPO3Q9Y5L0 923 aaKnown RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
SLIRP-210ENST00000557431 NUP214P35658 2090 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-210ENST00000557431 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ACOX3O15254 700 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 GMFGO60234 142 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 CDH16O75309 829 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 IL3P08700 152 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 CT45A8P0DMV1 189 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 CT45A9P0DMV2 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms