RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 MID1IP1Q9NPA3 183 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 ZFP64Q9NPA5 681 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.22□□□□□ -0.93
APEX1-218ENST00000557344 OXSMQ9NWU1 459 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 NMRK1Q9NWW6 199 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 QPCTLQ9NXS2 382 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 ZNF639Q9UID6 485 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 MCM8Q9UJA3 840 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 GRID1Q9ULK0 1009 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 STK38LQ9Y2H1 464 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 CHCHD2Q9Y6H1 151 aaPredicted RBP9.22□□□□□ -0.93
APEX1-218ENST00000557344 KIAA1549Q9HCM3 1950 aa9.22□□□□□ -0.93
APEX1-218ENST00000557344 CHD3Q12873 2000 aaKnown RBP9.22□□□□□ -0.93
APEX1-218ENST00000557344 SONP18583 2426 aaKnown RBP9.21□□□□□ -0.93
APEX1-218ENST00000557344 C2orf92A0A1B0GVN3 265 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 SH3D21A4FU49 640 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 MBD3L4A6NDZ8 208 aaPredicted RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 MBD3L5A6NJ08 208 aaPredicted RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 LRRC3CA6NJW4 275 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CD8B2A6NJW9 211 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CDH16O75309 829 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 GUCY1B2O75343 617 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CNOT4O95628 575 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 IL18BPO95998 194 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 NUDT17P0C025 328 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 KRT4P19013 534 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CSNK2A2P19784 350 aaPredicted RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 HMOX2P30519 316 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 OPRM1P35372 400 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 FEN1P39748 380 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 CCT5P48643 541 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 TRPC1P48995 793 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 NAGLUP54802 743 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 HMGCS1Q01581 520 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CRYZQ08257 329 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 MAP4K2Q12851 820 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 NTRK2Q16620 822 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 HMBOX1Q6NT76 420 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 FAM180BQ6P0A1 224 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 GALNT18Q6P9A2 607 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 SCIMPQ6UWF3 145 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 DND1Q8IYX4 353 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 C4orf33Q8N1A6 199 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 LIX1Q8N485 282 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CCNYL1Q8N7R7 359 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 OR7G1Q8NGA0 311 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 OR10G3Q8NGC4 313 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 RDH11Q8TC12 318 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 AENQ8WTP8 325 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 CTHRC1Q96CG8 243 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 NTNG2Q96CW9 530 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 HSPBAP1Q96EW2 488 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 SECISBP2Q96T21 854 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 TIMP4Q99727 224 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 RYDENQ9NUL5 291 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 SIRT5Q9NXA8 310 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 MAT2BQ9NZL9 334 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 CNOT11Q9UKZ1 510 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 BOKQ9UMX3 212 aaPredicted RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 EIF3LQ9Y262 564 aaKnown RBP9.21□□□□□ -0.94
APEX1-218ENST00000557344 DTX4Q9Y2E6 619 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 NPFFR2Q9Y5X5 522 aa9.21□□□□□ -0.94
APEX1-218ENST00000557344 MBD3L3A6NE82 208 aaPredicted RBP9.2□□□□□ -0.94
APEX1-218ENST00000557344 GOLGA6L10A6NI86 522 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 COPEO14579 308 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 CASKO14936 926 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 PCDH7O60245 1069 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 ERAL1O75616 437 aaKnown RBP9.2□□□□□ -0.94
APEX1-218ENST00000557344 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
APEX1-218ENST00000557344 CBX7O95931 251 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 IL3P08700 152 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 CPA3P15088 417 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 NT5EP21589 574 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 GPX3P22352 226 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 SERPINB3P29508 390 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 TIA1P31483 386 aaKnown RBP eCLIP9.2□□□□□ -0.94
APEX1-218ENST00000557344 NAA20P61599 178 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 KCNJ2P63252 427 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 KRTAP1-1Q07627 177 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 PCLAFQ15004 111 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.941e-8■■■□□ 17.2
APEX1-218ENST00000557344 ACKR1Q16570 336 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 PRSS53Q2L4Q9 553 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 SPIN4Q56A73 249 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 TMEM64Q6YI46 380 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 TRIM46Q7Z4K8 759 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 C17orf47Q8NEP4 570 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 ADCY4Q8NFM4 1077 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 MBD3L2Q8NHZ7 208 aaPredicted RBP9.2□□□□□ -0.94
APEX1-218ENST00000557344 PPP1R14CQ8TAE6 165 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.2□□□□□ -0.94
APEX1-218ENST00000557344 C16orf78Q8WTQ4 265 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 KLHL29Q96CT2 875 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 PERPQ96FX8 193 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 FAIM2Q9BWQ8 316 aa9.2□□□□□ -0.94
APEX1-218ENST00000557344 RBM24Q9BX46 236 aaKnown RBP9.2□□□□□ -0.94
APEX1-218ENST00000557344 PRDM14Q9GZV8 571 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms