RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SHQ1Q6PI26 577 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 CYP20A1Q6UW02 462 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 SPESP1Q6UW49 350 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 TMEM207Q6UWW9 146 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 DLEU7Q6UYE1 221 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 USP43Q70EL4 1123 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 LRRC8DQ7L1W4 858 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 CPNE9Q8IYJ1 553 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 MICU2Q8IYU8 434 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ELMOD1Q8N336 334 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ARL10Q8N8L6 244 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 KLHDC9Q8NEP7 349 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 KBTBD8Q8NFY9 601 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 DYNC2LI1Q8TCX1 351 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 MCOLN3Q8TDD5 553 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 FAR1Q8WVX9 515 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 SLC13A3Q8WWT9 602 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 FIG4Q92562 907 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 MYLPFQ96A32 169 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 YIPF6Q96EC8 236 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ZHX1-C8orf76Q96EF9 292 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 PCED1BQ96HM7 432 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 NSMCE3Q96MG7 304 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF583Q96ND8 569 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF300Q96RE9 604 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 KCNA7Q96RP8 456 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 IFT27Q9BW83 186 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 ZYG11BQ9C0D3 744 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 POLR1EQ9GZS1 481 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 CCDC90BQ9GZT6 254 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.44□□□□□ -1.71e-11■■■■□ 25.2
ATXN3-246ENST00000557030 DSN1Q9H410 356 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 DUSP21Q9H596 190 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 TRPV5Q9NQA5 729 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 TLR8Q9NR97 1041 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 NLE1Q9NVX2 485 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 NPAP1Q9NZP6 1156 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 CD274Q9NZQ7 290 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 MARCH4Q9P2E8 410 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 UPB1Q9UBR1 384 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 PLEKHB1Q9UF11 243 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 TRMT6Q9UJA5 497 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 INTS6Q9UL03 887 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 SAMD4AQ9UPU9 718 aaKnown RBP4.44□□□□□ -1.7
ATXN3-246ENST00000557030 INSL5Q9Y5Q6 135 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 AP1M2Q9Y6Q5 423 aa4.44□□□□□ -1.7
ATXN3-246ENST00000557030 PKD1L2Q7Z442 2459 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 IGLV3-10A0A075B6K4 115 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 ILVBLA1L0T0 632 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 FAM172BPA6NC97 362 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 EVPLLA8MZ36 301 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 CENPBD1B2RD01 187 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 C9JVG2 144 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PTGES3LE9PB15 166 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 M0QZ92 97 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 CXCR6O00574 342 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TNFRSF13BO14836 293 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 B4GAT1O43505 415 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 RGS14O43566 566 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TSPAN3O60637 253 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 DPM1O60762 260 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 RFPL2O75678 378 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 IFNA2P01563 188 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 HLA-DQA2P01906 255 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 APOA1P02647 267 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 MT-ND1P03886 318 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 MMP2P08253 660 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 SERPINF2P08697 491 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 IGFBP5P24593 272 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PSMA3P25788 255 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PSMB9P28065 219 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TNFSF8P32971 234 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 S100A5P33763 92 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 DCTP40126 519 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 EIF2DP41214 584 aaKnown RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 MAGEA2P43356 314 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PPP3CCP48454 512 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TRPC1P48995 793 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TTPAP49638 278 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 CLK1P49759 484 aaKnown RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 CLCN4P51793 760 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 SLC35A2P78381 396 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF45Q02386 682 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 EMX1Q04741 257 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PRKCDQ05655 676 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF235Q14590 738 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TAF1AQ15573 450 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TSNQ15631 228 aaKnown RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 NPTX1Q15818 432 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 AP5B1Q2VPB7 878 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 CTU2Q2VPK5 515 aaKnown RBP4.43□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF404Q494X3 552 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PLK5Q496M5 336 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 FBXO43Q4G163 708 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 PYCR3Q53H96 274 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 TOR1AIP1Q5JTV8 583 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 WDR45BQ5MNZ6 344 aa4.43□□□□□ -1.7
ATXN3-246ENST00000557030 LDLRAP1Q5SW96 308 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms