RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RNF222A6NCQ9 220 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 LRIT2A6NDA9 550 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 WASHC1A8K0Z3 465 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 MPTX1A8MV57 137 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 NPIPA2E9PIF3 369 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 NR5A2O00482 541 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 JAK2O60674 1132 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 HMMRO75330 724 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 KIAA0754O94854 1291 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 CCDC172P0C7W6 258 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 RPA2P15927 270 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 RIDAP52758 137 aaKnown RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 RAG2P55895 527 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 SRPXP78539 464 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 SPIBQ01892 262 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF699Q32M78 642 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ANKRD55Q3KP44 614 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 UNC50Q53HI1 259 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF772Q68DY9 489 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 MOB2Q70IA6 237 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 Q7L0L9 218 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 NET1Q7Z628 596 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 TSEN54Q7Z6J9 526 aaKnown RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 KCNMB4Q86W47 210 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF614Q8N883 585 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 BEST4Q8NFU0 473 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 OR52J3Q8NH60 311 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF606Q8WXB4 792 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 LHX4Q969G2 390 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 ART5Q96L15 291 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 AGAP4Q96P64 663 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 PAIP2Q9BPZ3 127 aaKnown RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 CABLES2Q9BTV7 478 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 GPR174Q9BXC1 333 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 UPF3AQ9H1J1 476 aaKnown RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 STARD5Q9NSY2 213 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 TAS2R16Q9NYV7 291 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 C6orf203Q9P0P8 240 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 COX16Q9P0S2 106 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 EMCNQ9ULC0 261 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 DHRS7Q9Y394 339 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 AP4B1Q9Y6B7 739 aa3.61□□□□□ -1.83
PRPF39-210ENST00000556718 EIF3AQ14152 1382 aaKnown RBP3.61□□□□□ -1.83
PRPF39-210ENST00000556718 IGHV4-30-2A0A087WSY4 118 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 C15orf38-AP3S2A0A0A6YYH1 394 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 GSAPA4D1B5 854 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 H3BMH7 237 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 K7ERI5 159 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 PDHXO00330 501 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 CLDN5O00501 218 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 RIPK2O43353 540 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF749O43361 778 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 SDC3O75056 442 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 PRAMEF12O95522 483 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 NUDT14O95848 222 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 UGT2B4P06133 528 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF853P0CG23 659 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 DRD5P21918 477 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 RFC2P35250 354 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 CHI3L1P36222 383 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 TRIM23P36406 574 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 TDO2P48775 406 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ARFIP1P53367 373 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 GSCP56915 257 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ACTR1AP61163 376 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 FKBP3Q00688 224 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 EIF2B1Q14232 305 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 TMEM187Q14656 261 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 KLHL40Q2TBA0 621 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ASPHD2Q6ICH7 369 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 LEG1Q6P5S2 330 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 SLC39A4Q6P5W5 647 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 CES3Q6UWW8 571 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 APOOLQ6UXV4 268 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF562Q6V9R5 426 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 NUFIP2Q7Z417 695 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 LHFPL4Q7Z7J7 247 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 LRRTM1Q86UE6 522 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 UNC5CLQ8IV45 518 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 KRT222Q8N1A0 295 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF781Q8N8C0 355 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 FAM184AQ8NB25 1140 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 OR1B1Q8NGR6 318 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 RLN3Q8WXF3 142 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 C11orf52Q96A22 123 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ANKRD9Q96BM1 317 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 TADA1Q96BN2 335 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 AKR1E2Q96JD6 320 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 RBM4Q9BWF3 364 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 FAM114A2Q9NRY5 505 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 DUS2Q9NX74 493 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 BARHL2Q9NY43 387 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 RARRES3Q9UL19 164 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 B9D1Q9UPM9 204 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms