RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 RBBP4Q09028 425 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MRPL49Q13405 166 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PTGR1Q14914 329 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 ZNF169Q14929 603 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PDK3Q15120 406 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 RFX4Q33E94 735 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 ABHD17BQ5VST6 288 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 LPCAT4Q643R3 524 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 TMEM154Q6P9G4 183 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 SLC2A7Q6PXP3 512 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 SCIMPQ6UWF3 145 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 UGT2A3Q6UWM9 527 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PAGE2Q7Z2X7 111 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 UBE3DQ7Z6J8 389 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MICU2Q8IYU8 434 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 TRIML2Q8N7C3 387 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 CSF3RQ99062 836 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MTERF1Q99551 399 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 THUMPD3Q9BV44 507 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 ANKRD60Q9BZ19 345 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 OR51B5Q9H339 312 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 LYRM4Q9HD34 91 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MYNNQ9NPC7 610 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 SERHLQ9NQF3 203 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 DMRT3Q9NQL9 472 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 FARSBQ9NSD9 589 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 TUBA8Q9NY65 449 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 STMN3Q9NZ72 180 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 DNAJB9Q9UBS3 223 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 GIMAP2Q9UG22 337 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 RPS6KA6Q9UK32 745 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 PACSIN3Q9UKS6 424 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MRPS33Q9Y291 106 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 DIDO1Q9BTC0 2240 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 CRYBG3Q68DQ2 2970 aa9.66□□□□□ -0.86
HNRNPC-225ENST00000556513 MYOCOSA0A1B0GUC4 107 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 GSTA4O15217 222 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 HIST1H1TP22492 207 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 PTPN6P29350 595 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 PPP2R1BP30154 601 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 TIA1P31483 386 aaKnown RBP eCLIP9.65□□□□□ -0.864e-7■■■■□ 24.7
HNRNPC-225ENST00000556513 LIM2P55344 173 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 SLC13A2Q13183 592 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 EXT1Q16394 746 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 RABL3Q5HYI8 236 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 OR52E8Q6IFG1 317 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ZNF793Q6ZN11 406 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 SPPL2CQ8IUH8 684 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ZNF595Q8IYB9 648 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 BEST3Q8N1M1 668 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 METTL4Q8N3J2 472 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ZCCHC7Q8N3Z6 543 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ACOT4Q8N9L9 421 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 GALNT11Q8NCW6 608 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 M1APQ8TC57 530 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 RGMAQ96B86 450 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 CPPED1Q9BRF8 314 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 SORBS1Q9BX66 1292 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 PRTFDC1Q9NRG1 225 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 PNO1Q9NRX1 252 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 DCAF13Q9NV06 445 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 MS4A12Q9NXJ0 267 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ANKRD10Q9NXR5 420 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 KCMF1Q9P0J7 381 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 VAPAQ9P0L0 249 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 AP4B1Q9Y6B7 739 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 ICE1Q9Y2F5 2266 aa9.65□□□□□ -0.86
HNRNPC-225ENST00000556513 SAGE2PA6NJ88 616 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 TGFBR3LH3BV60 316 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 CYR61O00622 381 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 CLDN4O14493 209 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 CDK2AP1O14519 115 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 SCAMP2O15127 329 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 CLOCKO15516 846 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 MAN1A2O60476 641 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 SCN2BO60939 215 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 FAM58BPP0C7Q3 252 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 ATP5A1P25705 553 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 MSX2P35548 267 aaPredicted RBP9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 SSR2P43308 183 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 TNFSF10P50591 281 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 GZMMP51124 257 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 RPS13P62277 151 aaKnown RBP9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.871e-8■■■□□ 14.8
HNRNPC-225ENST00000556513 ZNF763Q0D2J5 394 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 FADDQ13158 208 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 PDE7AQ13946 482 aa9.65□□□□□ -0.87
HNRNPC-225ENST00000556513 CAPRIN1Q14444 709 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms