RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 ZFP3Q96NJ6 502 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 EGFL8Q99944 293 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 KLHL31Q9H511 634 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 GSN-AS1Q9NRJ2 163 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 MRPL15Q9P015 296 aaKnown RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 Q9Y3F1 56 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 IGLV3-16A0A075B6K0 115 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 A0A0U1RQF3 1178 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 SEMA7AO75326 666 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 TNFRSF1BP20333 461 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 LHCGRP22888 699 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 LCN1P31025 176 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 EPHA4P54764 986 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 CASP9P55211 416 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 BPIFB3P59826 476 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 SPIBQ01892 262 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 TPBGQ13641 420 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 FAM74A1Q5RGS3 127 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 PDSS1Q5T2R2 415 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 CXorf57Q6NSI4 855 aaKnown RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 QSOX2Q6ZRP7 698 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 CHST9Q7L1S5 443 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 TRIM69Q86WT6 500 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 FOXRED2Q8IWF2 684 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 GPALPP1Q8IXQ4 340 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 CFAP52Q8N1V2 620 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 ZFP41Q8N8Y5 198 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 WDSUB1Q8N9V3 476 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 OR52N1Q8NH53 320 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 ASB11Q8WXH4 323 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 PTP4A1Q93096 173 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 DUSP26Q9BV47 211 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 SDHAF3Q9NRP4 125 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 ZSCAN32Q9NX65 697 aa8.09□□□□□ -1.11
MARK3-210ENST00000556463 MRTO4Q9UKD2 239 aaKnown RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 ZFP37Q9Y6Q3 630 aaPredicted RBP8.09□□□□□ -1.11
MARK3-210ENST00000556463 RPS10-NUDT3A0A1W2PQS6 291 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 F5H5T6 163 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 FPR3P25089 353 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 AVPR1BP47901 424 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 RPIAP49247 311 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 ACLYP53396 1101 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 PFN3P60673 137 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 BTG1P62324 171 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 PLA2G7Q13093 441 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 PLK5Q496M5 336 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 LIPJQ5W064 366 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 C11orf88Q6PI97 169 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 PTCHD4Q6ZW05 846 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 FAM26EQ8N5C1 309 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 CLDN19Q8N6F1 224 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 RELL2Q8NC24 303 aaPredicted RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 HMGB4Q8WW32 186 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 GEMIN6Q8WXD5 167 aaKnown RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 GTPBP3Q969Y2 492 aaKnown RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 CXorf40BQ96DE9 158 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 NXPE2Q96DL1 559 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 UBL7Q96S82 380 aaPredicted RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 PRR14Q9BWN1 585 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 APOL5Q9BWW9 433 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 POLR2J2Q9GZM3 115 aaKnown RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 NMNAT1Q9HAN9 279 aaPredicted RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 BRF2Q9HAW0 419 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 ZFP64Q9NPA5 681 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.12
MARK3-210ENST00000556463 ACAD8Q9UKU7 415 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 ENPP4Q9Y6X5 453 aa8.09□□□□□ -1.12
MARK3-210ENST00000556463 SLC22A23A1A5C7 686 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 ADAP00813 363 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 RRASP10301 218 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 OSMP13725 252 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 HSD3B1P14060 373 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 GRK4P32298 578 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 HOXA1P49639 335 aaPredicted RBP8.08□□□□□ -1.12
MARK3-210ENST00000556463 EVX1P49640 407 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 EEF1A1P68104 462 aaKnown RBP8.08□□□□□ -1.12
MARK3-210ENST00000556463 B4GALNT1Q00973 533 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 CHAF1BQ13112 559 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 PDE7AQ13946 482 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 PUM1Q14671 1186 aaKnown RBP eCLIP8.08□□□□□ -1.12
MARK3-210ENST00000556463 EEF1A1P5Q5VTE0 462 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 CD300LDQ6UXZ3 194 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 C3P1Q6ZMU1 363 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 ARIH2OSQ8N7S6 290 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 CREB3L1Q96BA8 519 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 RNFT2Q96EX2 444 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 SENP5Q96HI0 755 aaPredicted RBP8.08□□□□□ -1.12
MARK3-210ENST00000556463 SFXN2Q96NB2 322 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 ARL6Q9H0F7 186 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 ABCG5Q9H222 651 aa8.08□□□□□ -1.12
MARK3-210ENST00000556463 RUVBL1Q9Y265 456 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms