RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GOLGA8OA6NCC3 632 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 FRG2CA6NGY1 282 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 GOLGA8NF8WBI6 632 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 KLRC4-KLRK1H3BQV0 150 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 PPM1BO75688 479 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 GLSO94925 669 aaPredicted RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 TGDSO95455 350 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 IL2RAP01589 272 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 ABCB1P08183 1280 aaPredicted RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 EDN3P14138 238 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 DDX5P17844 614 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 CNR1P21554 472 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 ABCD3P28288 659 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 IL12AP29459 219 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 IDH3AP50213 366 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 MANFP55145 182 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 CORO7P57737 925 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 FBXW4P57775 412 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 UFM1P61960 85 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 PSG6Q00889 435 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 HSPB3Q12988 150 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 HLA-DQA1Q5Y7H0 255 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 SLC22A10Q63ZE4 541 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 FAM180AQ6UWF9 173 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 PRR22Q8IZ63 422 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 FBXW8Q8N3Y1 598 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 CPSF7Q8N684 471 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 NATD1Q8N6N6 113 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 POGLUT1Q8NBL1 392 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 ST6GALNAC3Q8NDV1 305 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 RNF138Q8WVD3 245 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 DYDC1Q8WWB3 177 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 HGDQ93099 445 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 TESCQ96BS2 214 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 PRPF18Q99633 342 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 LMF2Q9BU23 707 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 BHLHE41Q9C0J9 482 aaPredicted RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 CLMPQ9H6B4 373 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 MED4Q9NPJ6 270 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 OLAHQ9NV23 265 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 ATAD3AQ9NVI7 634 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 TAS2R9Q9NYW1 312 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 COL12A1Q99715 3063 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 UTP20O75691 2785 aaKnown RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 NUP214P35658 2090 aaPredicted RBP8.87□□□□□ -0.99
SRP54-210ENST00000556380 A0A1W2PRB8 838 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CLEC18AA5D8T8 446 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CAPN14A8MX76 684 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ADAM10O14672 748 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 EMC8O43402 210 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 TSPAN2O60636 221 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 COQ9O75208 318 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ERN1O75460 977 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 CRYABP02511 175 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 GNLYP22749 145 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 PIGAP37287 484 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ZFP36L2P47974 494 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 UQCRFS1P47985 274 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 MEOX1P50221 254 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 NRG3P56975 720 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 GPR85P60893 370 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 MRPL49Q13405 166 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 GAB1Q13480 694 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 RPS6KA2Q15349 733 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 NNATQ16517 81 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 HYAL4Q2M3T9 481 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 LSM12Q3MHD2 195 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 TMEM198Q66K66 360 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 TMEM81Q6P7N7 255 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CLEC18BQ6UXF7 455 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 FAM47EQ6ZV65 393 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 NUP54Q7Z3B4 507 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CHERPQ8IWX8 916 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 SLC34A3Q8N130 599 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CLEC18CQ8NCF0 446 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 OR2M7Q8NG81 312 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 OR4N2Q8NGD1 307 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CEP70Q8NHQ1 597 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ZFP28Q8NHY6 868 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 SPPL2AQ8TCT8 520 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 OMA1Q96E52 524 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 FAM120BQ96EK7 910 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 SLC35A4Q96G79 324 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 MAGED4Q96JG8 741 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 SECISBP2Q96T21 854 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 DUSP26Q9BV47 211 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 DPY30Q9C005 99 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 CXorf36Q9H7Y0 433 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 SACM1LQ9NTJ5 587 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 DDX18Q9NVP1 670 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 CNIH4Q9P003 139 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 ASH1LQ9NR48 2969 aaKnown RBP8.86□□□□□ -0.99
SRP54-210ENST00000556380 ZGRF1Q86YA3 2104 aa8.86□□□□□ -0.99
SRP54-210ENST00000556380 SPTBN1Q01082 2364 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 PRSS51A0A1B0GVH4 220 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 OR6C70A6NIJ9 312 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 TTC36A6NLP5 189 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms