RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 UNC5CO95185 931 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 C1QCP02747 245 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 PDGFAP04085 211 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ALOX5P09917 674 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 FBXO45P0C2W1 286 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 FAM87AP0C7U9 286 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 GPX2P18283 190 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ABCD3P28288 659 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 GABRA3P34903 492 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 PIGAP37287 484 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CD96P40200 585 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CYB561P49447 251 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 NRG3P56975 720 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 TUBA3CQ13748 450 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 DUSP5Q16690 384 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-219ENST00000555323 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 TUBA3EQ6PEY2 450 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 SZRD1Q7Z422 152 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ZNF227Q86WZ6 799 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-219ENST00000555323 LSM14AQ8ND56 463 aaKnown RBP11.7□□□□□ -0.54
SYNE2-219ENST00000555323 OR52N2Q8NGI0 321 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ADAMTS15Q8TE58 950 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 LRRC58Q96CX6 371 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CGREF1Q99674 301 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 EFCAB1Q9HAE3 211 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 EQTNQ9NQ60 294 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CBLCQ9ULV8 474 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 PCDHGB3Q9Y5G1 929 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 OR6C70A6NIJ9 312 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 FXYD1O00168 92 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 TSPAN2O60636 221 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 PPM1BO75688 479 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 NEURL1O76050 574 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 OR6B1O95007 311 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 AGR2O95994 175 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 GUSBP08236 651 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 BMP2P12643 396 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 PPIBP23284 216 aaKnown RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 CHI3L1P36222 383 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SOX3P41225 446 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 PNLIPRP2P54317 469 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 ZNF155Q12901 538 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 FADDQ13158 208 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 NFYCQ13952 458 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 RGNQ15493 299 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 NTRK2Q16620 822 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 TRMT5Q32P41 509 aaKnown RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 HACD2Q6Y1H2 254 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 DNAJC14Q6Y2X3 702 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 WDR53Q7Z5U6 358 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 DHDDSQ86SQ9 333 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 RNF130Q86XS8 419 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SLC34A3Q8N130 599 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 ZADH2Q8N4Q0 377 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 TMEM156Q8N614 296 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 GOLM1Q8NBJ4 401 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 CHDHQ8NE62 594 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 OR4N2Q8NGD1 307 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 GPR151Q8TDV0 419 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 ASB15Q8WXK1 588 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SLC9A6Q92581 669 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 ROPN1LQ96C74 230 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SPACA9Q96E40 222 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 AURKBQ96GD4 344 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SLC35G5Q96KT7 338 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 OR7D2Q96RA2 312 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 UTP23Q9BRU9 249 aaKnown RBP11.69□□□□□ -0.54
SYNE2-219ENST00000555323 YIPF4Q9BSR8 244 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 BTBD2Q9BX70 525 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 RAD21L1Q9H4I0 556 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 SH2D2AQ9NP31 389 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 GID8Q9NWU2 228 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 PLA2G3Q9NZ20 509 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 LRFN1Q9P244 771 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 KCNE3Q9Y6H6 103 aa11.69□□□□□ -0.54
SYNE2-219ENST00000555323 PKD1L2Q7Z442 2459 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 A8MVJ9 347 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 HMGN4O00479 90 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 MRASO14807 208 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 DPM1O60762 260 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 KCNK2O95069 426 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 IL33O95760 270 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 AK1P00568 194 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 LCN1P31025 176 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TMED10P49755 219 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TNFSF10P50591 281 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms