RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MEF2DQ14814 521 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 SYPL1Q16563 259 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 HSP90B2PQ58FF3 399 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 TMEM225Q6GV28 225 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 RBMS3Q6XE24 437 aaKnown RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 VPS36Q86VN1 386 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 PARGQ86W56 976 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 OFCC1Q8IZS5 231 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 LYG1Q8N1E2 194 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 BPIFCQ8NFQ6 507 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 GPR148Q8TDV2 347 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 FCAMRQ8WWV6 532 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 SMPDL3AQ92484 453 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 C11orf24Q96F05 449 aaPredicted RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 ZNF274Q96GC6 653 aaPredicted RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 OMDQ99983 421 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 BPIFA3Q9BQP9 254 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 PYGO2Q9BRQ0 406 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 C11orf70Q9BRQ4 267 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 CHRDL1Q9BU40 450 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 SHARPINQ9H0F6 387 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 GLT8D2Q9H1C3 349 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 CXXC4Q9H2H0 198 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 NEK6Q9HC98 313 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 FGF21Q9NSA1 209 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 EXOC1Q9NV70 894 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 FLRT3Q9NZU0 649 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 DBF4Q9UBU7 674 aaPredicted RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 PILRBQ9UKJ0 227 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 RIPK3Q9Y572 518 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 RNF215Q9Y6U7 377 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 A0A087WUV0 522 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 A0A1W2PPI3 338 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 A8MVM7 634 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 SPECC1L-ADORA2AF8WAN1 911 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 P2RX6O15547 441 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 RNF13O43567 381 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 DFNA5O60443 496 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 STK17BO94768 372 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 ATP1B1P05026 303 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 ALPIP09923 528 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 GSTT2P0CG29 244 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 GSTT2BP0CG30 244 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 NCK1P16333 377 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 MSH3P20585 1137 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 ANP32AP39687 249 aaKnown RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 NOVP48745 357 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 IRX1P78414 480 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 LGALS3BPQ08380 585 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 KIR2DS3Q14952 304 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 LPAL2Q16609 132 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 CDKN3Q16667 212 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 PARP6Q2NL67 630 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 ZNF699Q32M78 642 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 ACSF3Q4G176 576 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 ASPRV1Q53RT3 343 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 FAM53AQ6NSI3 398 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 CWC27Q6UX04 472 aaKnown RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 DPY19L2P2Q6ZN68 376 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 Q6ZPB1 254 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 DPY19L4Q7Z388 723 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 GTSCR1Q86UQ5 136 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 GPBP1Q86WP2 473 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 DNAJC22Q8N4W6 341 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 RELL2Q8NC24 303 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 NFAM1Q8NET5 270 aaPredicted RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 OR7A2PQ8NGA2 310 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 PCED1BQ96HM7 432 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 PANX1Q96RD7 426 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 CHP1Q99653 195 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 SIKE1Q9BRV8 207 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 RHOJQ9H4E5 214 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 XKR8Q9H6D3 395 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 EGLN3Q9H6Z9 239 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 VIPAS39Q9H9C1 493 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 LPAR2Q9HBW0 351 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 APOBEC3GQ9HC16 384 aaKnown RBP4.54□□□□□ -1.68
VRK1-203ENST00000555067 GDF3Q9NR23 364 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 PISDQ9UG56 409 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 FBXL4Q9UKA2 621 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 EMCNQ9ULC0 261 aa4.54□□□□□ -1.68
VRK1-203ENST00000555067 LOC101059948A0A1B0GTJ6 334 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 BTBD17A6NE02 478 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 TCP11X1B4DZS4 312 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 H3BTX0 84 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 SH2D1BO14796 132 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 RNF113AO15541 343 aaKnown RBP4.53□□□□□ -1.68
VRK1-203ENST00000555067 ARHGEF9O43307 516 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 AKR7A2O43488 359 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ANP32DO95626 131 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 NDUFB10O96000 172 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 IGHV4-31P0DP07 118 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 CD9P21926 228 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 GLRA1P23415 457 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 PSMA2P25787 234 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 EPHA2P29317 976 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 NF2P35240 595 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 MATKP42679 507 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 HTR5AP47898 357 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms