RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PDP1Q9P0J1 537 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 EVLQ9UI08 416 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 KCNE5Q9UJ90 142 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ING1Q9UK53 422 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ANGPT4Q9Y264 503 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLC22A14Q9Y267 594 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SH3BP1Q9Y3L3 701 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SAMHD1Q9Y3Z3 626 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CMAHPQ9Y471 501 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PCDHB9Q9Y5E1 797 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CIB4A0PJX0 185 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 BOLA2-SMG1P6H3BVE0 249 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 TNFRSF11BO00300 401 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC9A3R1O14745 358 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC16A8O95907 504 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 IL5P05113 134 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CEACAM5P06731 702 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ADRB3P13945 408 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ATP6V1B1P15313 513 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 TSPAN8P19075 237 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 OR1D2P34982 312 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC6A11P48066 632 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC9A3P48764 834 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 DGKGP49619 791 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GZMKP49863 264 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 KHKP50053 298 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PPP2CBP62714 309 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PPP2CAP67775 309 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GALK2Q01415 458 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PRDX1Q06830 199 aaKnown RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PDGFRLQ15198 375 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 MPPED2Q15777 294 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 STK11Q15831 433 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 INAQ16352 499 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 BAK1Q16611 211 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PRTGQ2VWP7 1150 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF284Q2VY69 593 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 LINC01590Q5TEZ4 76 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 EGFLAMQ63HQ2 1017 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 B3GNTL1Q67FW5 361 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF544Q6NX49 715 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CBLN3Q6UW01 205 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC36A4Q6YBV0 504 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC36A1Q7Z2H8 476 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 OAFQ86UD1 273 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ZBTB46Q86UZ6 589 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CELF5Q8N6W0 485 aaKnown RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 BPIFB6Q8NFQ5 453 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 OR4A15Q8NGL6 344 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 OR5M3Q8NGP4 307 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 OR6P1Q8NGX9 317 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 LILRB4Q8NHJ6 448 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GPBAR1Q8TDU6 330 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 JPH3Q8WXH2 748 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 EDAQ92838 391 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GAL3ST3Q96A11 431 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 RGMAQ96B86 450 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ADAM19Q9H013 955 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SMG9Q9H0W8 520 aaKnown RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CDCP1Q9H5V8 836 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 REEP1Q9H902 201 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 BARX1Q9HBU1 254 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ABCB9Q9NP78 766 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ERVK13-1Q9NX77 482 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SCN3BQ9NY72 215 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GDE1Q9NZC3 331 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 MUTYHQ9UIF7 546 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC25A13Q9UJS0 675 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CCL26Q9Y258 94 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 N6AMT1Q9Y5N5 214 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SLC22A7Q9Y694 548 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CCDC88CQ9P219 2028 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 MEIKINA0A087WXM9 373 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1B0GTI1 187 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 PNMA8CA0A1B0GUJ8 204 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 F5H423 210 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 K7EQS6 105 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 NDUFA2O43678 99 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 BRINP1O60477 761 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 TMCC2O75069 709 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ENTPD6O75354 484 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 APBB3O95704 486 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ADH1BP00325 375 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 FGBP02675 491 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 SAGP10523 405 aaPredicted RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GLULP15104 373 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ARSBP15848 533 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 S100A1P23297 94 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 DPP4P27487 766 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 HTR2AP28223 471 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 GDF5P43026 501 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 KIR2DL3P43628 341 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 RPS13P62277 151 aaKnown RBP3.21□□□□□ -1.9
SEC23A-207ENST00000554615 QRFPP83859 136 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 TNFRSF17Q02223 184 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 CD300CQ08708 224 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 FUT7Q11130 342 aa3.21□□□□□ -1.9
SEC23A-207ENST00000554615 ZP4Q12836 540 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms