RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ANKRD33BA6NCL7 494 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 LRRC3CA6NJW4 275 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 E9PLN8 166 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 NPIPB8E9PQR5 432 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 BCKDKO14874 412 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 BIRC5O15392 142 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ITM2AO43736 263 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 UGT2B11O75310 529 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 TRIM3O75382 744 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 SLITRK5O94991 958 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 SNX4O95219 450 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 IGHG3P01860 377 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 DDX5P17844 614 aaKnown RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 EFNA1P20827 205 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 BGNP21810 368 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 RFX3P48380 749 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 MANFP55145 182 aaKnown RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ABCE1P61221 599 aaKnown RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ZNHIT3Q15649 155 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 PDCD2Q16342 344 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 HYAL4Q2M3T9 481 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 GXYLT1Q4G148 440 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ZNF787Q6DD87 383 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 TMEM211Q6ICI0 200 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 XKRXQ6PP77 449 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 NPSR1Q6W5P4 371 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 LARP4Q71RC2 724 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 R3HCC1LQ7Z5L2 792 aaKnown RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 FNDC5Q8NAU1 212 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 OR1J4Q8NGS1 313 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 MGARPQ8TDB4 240 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 SARAFQ96BY9 339 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 EFHD2Q96C19 240 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 SDCCAG3Q96C92 435 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 TMCO6Q96DC7 493 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 PGM2Q96G03 612 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 FCRL1Q96LA6 429 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 VSTM2LQ96N03 204 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 COL21A1Q96P44 957 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 BTBD9Q96Q07 612 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 NODALQ96S42 347 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ADOQ96SZ5 270 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 VKORC1Q9BQB6 163 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ANGPTL4Q9BY76 406 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ZNF395Q9H8N7 513 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 EQTNQ9NQ60 294 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 PNPLA3Q9NST1 481 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 COQ3Q9NZJ6 369 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 MAPRE3Q9UPY8 281 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 EXO1Q9UQ84 846 aaKnown RBP9.77□□□□□ -0.85
SHMT2-213ENST00000554600 ACTL7BQ9Y614 415 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 MPDZO75970 2070 aa9.77□□□□□ -0.85
SHMT2-213ENST00000554600 KIAA1549Q9HCM3 1950 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 A0A087WV62 115 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 C15orf38-AP3S2A0A0A6YYH1 394 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 OR14I1A6ND48 311 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 PRAMEF25A6NGN4 478 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 FIGNL2A6NMB9 653 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 AQP7O14520 342 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 TO15178 435 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 SUSD5O60279 629 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 HCN1O60741 890 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ABCB7O75027 752 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 CT45A8P0DMV1 189 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 CT45A9P0DMV2 189 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 GRK2P25098 689 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 HTR1EP28566 365 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 DCTP40126 519 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 SLC1A6P48664 564 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 PRKAG1P54619 331 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 MRPS22P82650 360 aaKnown RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 STX3Q13277 289 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ART3Q13508 389 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 EFR3AQ14156 821 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 MPP2Q14168 576 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ZNF385BQ569K4 471 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 CT45A2Q5DJT8 189 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 XKR7Q5GH72 579 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 C6orf136Q5SQH8 315 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 WLSQ5T9L3 541 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 IL23RQ5VWK5 629 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 SLC30A6Q6NXT4 461 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ZNF781Q8N8C0 355 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 OR10Q1Q8NGQ4 319 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 PHF10Q8WUB8 498 aaKnown RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 HGDQ93099 445 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ELP4Q96EB1 424 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 ZBED6CLQ96FA7 236 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 CHMP6Q96FZ7 201 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 C3orf30Q96M34 536 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 GNRHR2Q96P88 292 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 DMRTA2Q96SC8 542 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 GALNT9Q9HCQ5 603 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 QPCTLQ9NXS2 382 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 C19orf53Q9UNZ5 99 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 EIF3LQ9Y262 564 aaKnown RBP9.76□□□□□ -0.85
SHMT2-213ENST00000554600 C15orf41Q9Y2V0 281 aa9.76□□□□□ -0.85
SHMT2-213ENST00000554600 HEATR5AQ86XA9 2040 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms