RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRAMEF20Q5VT98 475 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 AADACL4Q5VUY2 407 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 TBC1D10CQ8IV04 446 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 PSTKQ8IV42 348 aaKnown RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 BHLHE23Q8NDY6 225 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 U2AF1L4Q8WU68 220 aaKnown RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 RLN3Q8WXF3 142 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 DHTKD1Q96HY7 919 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 FOXN4Q96NZ1 517 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 BCL7BQ9BQE9 202 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 JPH2Q9BR39 696 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 RPP25Q9BUL9 199 aaKnown RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 CCDC28BQ9BUN5 200 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 CRNKL1Q9BZJ0 848 aaKnown RBP4.04□□□□□ -1.76
SCFD1-211ENST00000554437 TRPV6Q9H1D0 765 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 ADNPQ9H2P0 1102 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 ZNF665Q9H7R5 613 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 YAE1D1Q9NRH1 226 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 DEPPQ9NTK1 212 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 MED17Q9NVC6 651 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 HYPKQ9NX55 129 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 CHRNA9Q9UGM1 479 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 TEKT2Q9UIF3 430 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 PTCH1Q13635 1447 aa4.04□□□□□ -1.76
SCFD1-211ENST00000554437 TMEM94Q12767 1356 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 SERTM2A0A1B0GWG4 89 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 K7EQG2 157 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 LGALS8O00214 317 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 POLR3GO15318 223 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-211ENST00000554437 PSMD3O43242 534 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 GMNNO75496 209 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 SERPINA3P01011 423 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 S100A9P06702 114 aaKnown RBP4.03□□□□□ -1.76
SCFD1-211ENST00000554437 ODC1P11926 461 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 EZRP15311 586 aaKnown RBP4.03□□□□□ -1.76
SCFD1-211ENST00000554437 LMO2P25791 158 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 CCZ1BP86790 482 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 CCZ1P86791 482 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-211ENST00000554437 PDK3Q15120 406 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 SPINK14Q6IE38 97 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 ZNF774Q6NX45 483 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 CLEC2AQ6UVW9 174 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 GRAMD2AQ8IUY3 354 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 STHQ8IWL8 128 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 THEM5Q8N1Q8 247 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 C4orf32Q8N8J7 132 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 C8orf46Q8TAG6 207 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 GGHQ92820 318 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 NABP1Q96AH0 204 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 ANKRD27Q96NW4 1050 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 ERGIC2Q96RQ1 377 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 GON7Q9BXV9 100 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 LRRC2Q9BYS8 371 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 PKIBQ9C010 78 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 LRRCC1Q9C099 1032 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 PNNQ9H307 717 aaKnown RBP4.03□□□□□ -1.76
SCFD1-211ENST00000554437 EHD1Q9H4M9 534 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 SP140LQ9H930 580 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 COG4Q9H9E3 785 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 COPS7AQ9UBW8 275 aa4.03□□□□□ -1.76
SCFD1-211ENST00000554437 ABCC4O15439 1325 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 KIF16BQ96L93 1317 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 IGLON5A6NGN9 336 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SLC15A5A6NIM6 579 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ANKRD30BLA7E2S9 258 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 A8MUI8 341 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 TMCO5BA8MYB1 307 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SRRM5B3KS81 715 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 KIF2AO00139 706 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 FBP2O00757 339 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SYT7O43581 403 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ECI2O75521 394 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 GSTA2P09210 222 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 UQCRFS1P1P0C7P4 283 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 RRASP10301 218 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 CD9P21926 228 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 NUMBP49757 651 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ACY1Q03154 408 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ARHGAP19Q14CB8 494 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 WDR43Q15061 677 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 KRT31Q15323 416 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF239Q16600 458 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 MUC21Q5SSG8 566 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SNRNP48Q6IEG0 339 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 EFL1Q7Z2Z2 1120 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 CACUL1Q86Y37 369 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SIDT2Q8NBJ9 832 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 OR8J1Q8NGP2 316 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 OR6F1Q8NGZ6 308 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 OR52J3Q8NH60 311 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 GOLGA5Q8TBA6 731 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 HAS2Q92819 552 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 NT5C3BQ969T7 300 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ULK4Q96C45 1275 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 MTG1Q9BT17 334 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms