RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ZXDBP98169 803 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RHAGQ02094 409 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 GTF2H3Q13889 308 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 C1DQ13901 141 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PTGR1Q14914 329 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 INAVAQ3KP66 663 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CCNJQ5T5M9 372 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 GPRC6AQ5T6X5 926 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ARMC12Q5T9G4 340 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RSBN1Q5VWQ0 802 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 LRRC66Q68CR7 880 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TIGD3Q6B0B8 471 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF585AQ6P3V2 769 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NCEH1Q6PIU2 408 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 AHSA2Q719I0 299 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CCDC190Q86UF4 302 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CYP4Z1Q86W10 505 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RNF130Q86XS8 419 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RAB43Q86YS6 212 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SFTPA1Q8IWL2 248 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 STX19Q8N4C7 294 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 DNAJC22Q8N4W6 341 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 LINC00471Q8N535 108 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 FAM86B1Q8N7N1 296 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ASCC1Q8N9N2 400 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 C11orf65Q8NCR3 313 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 LILRB4Q8NHJ6 448 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF675Q8TD23 568 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SETD7Q8WTS6 366 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SELENOMQ8WWX9 145 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 AP3S1Q92572 193 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 REPS1Q96D71 796 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PPP1R16AQ96I34 528 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TRNT1Q96Q11 434 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PANX1Q96RD7 426 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SLC30A2Q9BRI3 323 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 DOHHQ9BU89 302 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 GPR63Q9BZJ6 419 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TPK1Q9H3S4 243 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 GAREM1Q9H706 876 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RMI1Q9H9A7 625 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 BRF2Q9HAW0 419 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NEK6Q9HC98 313 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PCDH12Q9NPG4 1184 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SERHLQ9NQF3 203 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ABCB10Q9NRK6 738 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TM7SF3Q9NS93 570 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 IMPAD1Q9NX62 359 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CFAP97Q9P2B7 532 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 DEC1Q9P2X7 70 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 VPS4AQ9UN37 437 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SATB2Q9UPW6 733 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TMEM98Q9Y2Y6 226 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PCDHGB6Q9Y5F9 930 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PCDHGA3Q9Y5H0 932 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 TNRC6BQ9UPQ9 1833 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 DENND4CQ5VZ89 1909 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PLXND1Q9Y4D7 1925 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 OBSL1O75147 1896 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 IQCMA0A1B0GVH7 501 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 A0A1W2PQF6 199 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 UBE2QL1A1L167 161 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 TRABD2BA6NFA1 517 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 HMX3A6NHT5 357 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SNTNA6NMZ2 147 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 AGAP14A8MT82 685 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CCL22O00626 93 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 FPGTO14772 594 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 HOXC11O43248 304 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PROM1O43490 865 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SCO2O43819 266 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 XPNPEP2O43895 674 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 TMEM127O75204 238 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SNAPC5O75971 98 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PDE9AO76083 593 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PRB1P04280 392 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 YES1P07947 543 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 OR56A5P0C7T3 313 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PLA2G2AP14555 144 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 JUPP14923 745 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF20P17024 532 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CFL1P23528 166 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PTPN6P29350 595 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 FMO3P31513 532 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ACVRL1P37023 503 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SPAM1P38567 509 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 GSTM5P46439 218 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 HSPA7P48741 367 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 RGS6P49758 472 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 HTR6P50406 440 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 MAPK10P53779 464 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 OR2B6P58173 313 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SMIM11AP58511 58 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ARPC4P59998 168 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 IFITM3Q01628 133 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SCN1BQ07699 218 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 NFATC2Q13469 925 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms