RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 DTX4Q9Y2E6 619 aa8.59□□□□□ -1.03
CHD8-206ENST00000553870 OR10H1Q9Y4A9 318 aa8.59□□□□□ -1.03
CHD8-206ENST00000553870 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GOLGA8QA0A0J9YX86 632 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GOLGA8OA6NCC3 632 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 DUXAA6NLW8 204 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GOLGA8NF8WBI6 632 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ACOT7O00154 380 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 POLR3GO15318 223 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 CFLARO15519 480 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ASNA1O43681 348 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 TSPAN2O60636 221 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 EDF1O60869 148 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 SCN2BO60939 215 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 REM1O75628 298 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 SLC22A3O75751 556 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GLSO94925 669 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 NKX2-2O95096 273 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 KCNH1O95259 989 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 IL6P05231 212 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 CCL3P10147 92 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ZNF24P17028 368 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 MST1P26927 711 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 CASP3P42574 277 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 IDH3AP50213 366 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ST13P50502 369 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 CDK9P50750 372 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 AQP5P55064 265 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 WNT3P56703 355 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 FBXW4P57775 412 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 UFM1P61960 85 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 PPIAP62937 165 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 RBPJQ06330 500 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 FOXO1Q12778 655 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GAB1Q13480 694 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 EXOSC6Q5RKV6 272 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 TMEM198Q66K66 360 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 OR4F3Q6IEY1 312 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 SIAH3Q8IW03 269 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 SLC44A2Q8IWA5 706 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 GHDCQ8N2G8 530 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GOT1L1Q8NHS2 421 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 HGDQ93099 445 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 TMBIM1Q969X1 311 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 NTNG2Q96CW9 530 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 FAM120BQ96EK7 910 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 GIMAP5Q96F15 307 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 GPR137Q96N19 417 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 COL21A1Q96P44 957 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 OR52B2Q96RD2 323 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 STACQ99469 402 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ANKRA2Q9H9E1 313 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 SIRT3Q9NTG7 399 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 BTNL2Q9UIR0 455 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 CBLCQ9ULV8 474 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 BOKQ9UMX3 212 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 PCDHGB3Q9Y5G1 929 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 RP1L1Q8IWN7 2480 aaPredicted RBP8.58□□□□□ -1.04
CHD8-206ENST00000553870 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
CHD8-206ENST00000553870 NPIPA5E9PKD4 350 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 TFECO14948 347 aaPredicted RBP8.57□□□□□ -1.04
CHD8-206ENST00000553870 HS6ST1O60243 411 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 TRIM3O75382 744 aaPredicted RBP8.57□□□□□ -1.04
CHD8-206ENST00000553870 IL33O95760 270 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 C6orf47O95873 294 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PGRP06401 933 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 ALOX5P09917 674 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 UQCRC2P22695 453 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 GNLYP22749 145 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 ELAVL4P26378 380 aaKnown RBP8.57□□□□□ -1.04
CHD8-206ENST00000553870 IL12BP29460 328 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 GABRA3P34903 492 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PIGAP37287 484 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PRKAG1P54619 331 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 CORO7P57737 925 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 GPR85P60893 370 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 KCNJ2P63252 427 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 HBA1P69905 142 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PHC1P78364 1004 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 TXNL4AP83876 142 aaKnown RBP8.57□□□□□ -1.04
CHD8-206ENST00000553870 PMP22Q01453 160 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PLGLB1Q02325 96 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 ZNF155Q12901 538 aaPredicted RBP8.57□□□□□ -1.04
CHD8-206ENST00000553870 TP53BP2Q13625 1128 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 SLC10A1Q14973 349 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 FAM174BQ3ZCQ3 159 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 SPDYE7PQ495Y7 208 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 METTL21CQ5VZV1 264 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 MFSD12Q6NUT3 480 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 NPSR1Q6W5P4 371 aa8.57□□□□□ -1.04
CHD8-206ENST00000553870 PRR22Q8IZ63 422 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms