RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MMP21Q8N119 569 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 ZNF615Q8N8J6 731 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 L3MBTL4Q8NA19 623 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 C9orf106Q8NAJ2 232 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 C17orf47Q8NEP4 570 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 OR4K17Q8NGC6 315 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 OR52B6Q8NGF0 335 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 OR52R1Q8NGF1 315 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 MBD3L2Q8NHZ7 208 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-208ENST00000553370 WDR20Q8TBZ3 569 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 SELENOMQ8WWX9 145 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 UCN3Q969E3 161 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 ADIPOR1Q96A54 375 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 TMCO6Q96DC7 493 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 MBD6Q96DN6 1003 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 WDYHV1Q96HA8 205 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 COL21A1Q96P44 957 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 FAM111AQ96PZ2 611 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 TUBA1CQ9BQE3 449 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 GSX2Q9BZM3 304 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 UBQLN3Q9H347 655 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 PIGMQ9H3S5 423 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-208ENST00000553370 GALNT9Q9HCQ5 603 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 GALNT8Q9NY28 637 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 TAS2R10Q9NYW0 307 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 NDRG3Q9UGV2 375 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 ADAM29Q9UKF5 820 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 SNX6Q9UNH7 406 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 DTX4Q9Y2E6 619 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 CSPG4Q6UVK1 2322 aa9.03□□□□□ -0.96
ACTN1-208ENST00000553370 ZANQ9Y493 2812 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 TMEM238LA0A1B0GVL6 79 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 GNG14A0A1W2PPG7 69 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 OR7A17O14581 309 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 ARHGEF9O43307 516 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 ICOSLGO75144 302 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 CBR3O75828 277 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 OTCP00480 354 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 NAGAP17050 411 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 KCNJ5P48544 419 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 SNTA1Q13424 505 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 TECRLQ5HYJ1 363 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 NHSL2Q5HYW2 709 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 TEX35Q5T0J7 233 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PPP4R4Q6NUP7 873 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 SLC48A1Q6P1K1 146 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 FAM111BQ6SJ93 734 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 Q71RC1 249 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-208ENST00000553370 WFDC11Q8NEX6 87 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 CDC26Q8NHZ8 85 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 ISL2Q96A47 359 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 BEX4Q9NWD9 120 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PSD3Q9NYI0 1048 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PCTPQ9UKL6 214 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 UTS2RQ9UKP6 389 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PACSIN3Q9UKS6 424 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 TMA7Q9Y2S6 64 aaKnown RBP9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PLLPQ9Y342 182 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 OR10H1Q9Y4A9 318 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 PCDHA9Q9Y5H5 950 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 USF3Q68DE3 2245 aa9.02□□□□□ -0.97
ACTN1-208ENST00000553370 ESYT3A0FGR9 886 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 SMPD2O60906 423 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 UGT2B11O75310 529 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 BCAS2O75934 225 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 ATP1B1P05026 303 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 HMOX2P30519 316 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 EEF1A1P68104 462 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 MRPS35P82673 323 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 LTBQ06643 244 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 CKAP4Q07065 602 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 ZNF155Q12901 538 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 GAB1Q13480 694 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 EFR3AQ14156 821 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 LTB4RQ15722 352 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 PRICKLE4Q2TBC4 344 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 EEF1A1P5Q5VTE0 462 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 FNDC7Q5VTL7 733 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 CLEC9AQ6UXN8 241 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 LARP4Q71RC2 724 aaKnown RBP eCLIP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 PLCZ1Q86YW0 608 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 UBQLNLQ8IYU4 475 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 METTL4Q8N3J2 472 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 C1orf52Q8N6N3 182 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 GBP7Q8N8V2 638 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 ZPLD1Q8TCW7 415 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 C18orf12Q96KH6 178 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 DACH2Q96NX9 599 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 NODALQ96S42 347 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 MED18Q9BUE0 208 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 OR2B2Q9GZK3 357 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms