RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ZFYVE21Q9BQ24 234 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 NTN4Q9HB63 628 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 HRASLS2Q9NWW9 162 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 FAF1Q9UNN5 650 aaPredicted RBP18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 KLHL20Q9Y2M5 609 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 OR5K3A6NET4 321 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 SAC3D1A6NKF1 404 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 UPK1AO00322 258 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 IGHEP01854 428 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 C1QCP02747 245 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 SEMG1P04279 462 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 CHI3L1P36222 383 aaPredicted RBP18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 ALDH9A1P49189 494 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 TXNL4AP83876 142 aaKnown RBP18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 DCAF10Q5QP82 559 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 MRGPREQ86SM8 312 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 SVOPLQ8N434 492 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 CBR4Q8N4T8 237 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 ITLN2Q8WWU7 325 aaPredicted RBP18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 CLIP3Q96DZ5 547 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 CXorf36Q9H7Y0 433 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 SYNPO2LQ9H987 977 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 ZBTB20Q9HC78 741 aaPredicted RBP18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 SLC35C2Q9NQQ7 365 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 OAZ3Q9UMX2 235 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 ABCA2Q9BZC7 2435 aa18.6■□□□□ 0.57
CTDSP2-204ENST00000548823 ZBTB11O95625 1053 aaPredicted RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 ARAFP10398 606 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 OTX2P32243 289 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 GTF2A1P52655 376 aaPredicted RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 SOX8P57073 446 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 EEF1A2Q05639 463 aaKnown RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 NCF4Q15080 339 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 PDK3Q15120 406 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 CEBPEQ15744 281 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 NRF1Q16656 503 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 PRAMEF17Q5VTA0 474 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 TRIM73Q86UV7 250 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 ZNF655Q8N720 491 aaPredicted RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 PNPT1Q8TCS8 783 aaKnown RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 UTP15Q8TED0 518 aaKnown RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 TRAPPC9Q96Q05 1148 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 SERINC2Q96SA4 455 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 WDR77Q9BQA1 342 aaPredicted RBP18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 POMT2Q9UKY4 750 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 PADI2Q9Y2J8 665 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 V9GYQ6 96 aa18.59■□□□□ 0.57
CTDSP2-204ENST00000548823 RNF103-CHMP3A0A140T963 221 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 A0A1W2PR48 441 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 MYO1GB0I1T2 1018 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 TXNDC9O14530 226 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 ZSCAN9O15535 394 aaPredicted RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 PROM1O43490 865 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 CTSVO60911 334 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 HPRP00739 348 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 LYNP07948 512 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 ZNF10P21506 573 aaPredicted RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 NTSP30990 170 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 CRATP43155 626 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 SSPNQ14714 243 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 NHSL2Q5HYW2 709 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 ARMC6Q6NXE6 501 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 SLC48A1Q6P1K1 146 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 TMEM64Q6YI46 380 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 PIWIL3Q7Z3Z3 882 aaKnown RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 EXOSC8Q96B26 276 aaKnown RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 DPH2Q9BQC3 489 aaPredicted RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 IL1RAPQ9NPH3 570 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 SIRT3Q9NTG7 399 aaPredicted RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 ADPRHL2Q9NX46 363 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 THUMPD1Q9NXG2 353 aaKnown RBP18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 PHF11Q9UIL8 331 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 CES1P1Q9UKY3 287 aa18.58■□□□□ 0.57
CTDSP2-204ENST00000548823 A0A0G2JN53 185 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 CST1P01037 141 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 ETFAP13804 333 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 SOAT1P35610 550 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 LRRC23Q53EV4 343 aaPredicted RBP18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 VWA2Q5GFL6 755 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 COX20Q5RI15 118 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 UGT2A3Q6UWM9 527 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 CHERPQ8IWX8 916 aaKnown RBP18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF295-AS1Q8N0V1 137 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 CARFQ8N187 725 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 CLEC4FQ8N1N0 589 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 METTL25Q8N6Q8 603 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 SFXN5Q8TD22 340 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 TMBIM1Q969X1 311 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 MOAP1Q96BY2 351 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 VPS50Q96JG6 964 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 RDH12Q96NR8 316 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 AMDHD1Q96NU7 426 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 OSBPL10Q9BXB5 764 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 SCOCQ9UIL1 159 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 UTS2RQ9UKP6 389 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 PSME2Q9UL46 239 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 ATG4BQ9Y4P1 393 aa18.57■□□□□ 0.56
CTDSP2-204ENST00000548823 NIPBLQ6KC79 2804 aaeCLIP18.57■□□□□ 0.565e-6■■■□□ 16.7
CTDSP2-204ENST00000548823 SPG11Q96JI7 2443 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms