RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HYLS1Q96M11 299 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF582Q96NG8 517 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 KCNJ15Q99712 375 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 KCNS3Q9BQ31 491 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM246Q9BRR3 403 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 RIOK2Q9BVS4 552 aaKnown RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FNDC11Q9BVV2 318 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FAIM2Q9BWQ8 316 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PINK1Q9BXM7 581 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 ROGDIQ9GZN7 287 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PPP1R3EQ9H7J1 279 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 ABCB9Q9NP78 766 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SEMA3GQ9NS98 782 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SNTG1Q9NSN8 517 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 B3GNT2Q9NY97 397 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 STMN3Q9NZ72 180 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CRIM1Q9NZV1 1036 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TAAR2Q9P1P5 351 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SEC14L3Q9UDX4 400 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PLEKHB1Q9UF11 243 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 MUTYHQ9UIF7 546 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CBLCQ9ULV8 474 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GABRQQ9UN88 632 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 LIPT1Q9Y234 373 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TTC3P53804 2025 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TRBV4-1A0A0J9YWV2 114 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 A0A0U1RQS6 177 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PQU0 124 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MEGF11A6BM72 1044 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TUBAL3A6NHL2 446 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ANKDD1BA6NHY2 528 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 HEPACAM2A8MVW5 462 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LEFTY2O00292 366 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 FFAR1O14842 300 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PLD2O14939 933 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TMPRSS2O15393 492 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 KCNJ13O60928 360 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 CLEC3AO75596 197 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SOX30O94993 753 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LRG1P02750 347 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PRNPP04156 253 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 KLK1P06870 262 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 IL3P08700 152 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 IFI6P09912 130 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ELFN1P0C7U0 828 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SLC2A2P11168 524 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 NAT2P11245 290 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 NID1P14543 1247 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 HK1P19367 917 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 C4BPBP20851 252 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 POU1F1P28069 291 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 CTGFP29279 349 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 NTSP30990 170 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MTNR1AP48039 350 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MTNR1BP49286 362 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 INPP1P49441 399 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 EVX1P49640 407 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MAPK12P53778 367 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ATP12AP54707 1039 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LIM2P55344 173 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PRMT2P55345 433 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TAS2R43P59537 309 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 REEP5Q00765 189 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TSPAN31Q12999 210 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MRPL28Q13084 256 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TARDBPQ13148 414 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 HNRNPA0Q13151 305 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TP53BP2Q13625 1128 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TRAM2Q15035 370 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ARHGEF6Q15052 776 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 BAK1Q16611 211 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MPEG1Q2M385 716 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SPDYE7PQ495Y7 208 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ARHGAP15Q53QZ3 475 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PYDC2Q56P42 97 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 EXOSC6Q5RKV6 272 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TXNDC8Q6A555 127 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 RPL13AP3Q6NVV1 102 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM220Q6QAJ8 160 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PAMR1Q6UXH9 720 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF852Q6ZMS4 543 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 C6orf120Q7Z4R8 191 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 HSD11B1LQ7Z5J1 315 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TPRA1Q86W33 373 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 C17orf64Q86WR6 236 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TMC8Q8IU68 726 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LAX1Q8IWV1 398 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SAMD14Q8IZD0 417 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TCEANCQ8N8B7 351 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SRFBP1Q8NEF9 429 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 GPR32P1Q8NGA4 272 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 OR4K5Q8NGD3 323 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 OR2L2Q8NH16 312 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 DNAJA4Q8WW22 397 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 JPH3Q8WXH2 748 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms