RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HSPB2Q16082 182 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 ERCC6LQ2NKX8 1250 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 CCDC153Q494R4 210 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 SPDYAQ5MJ70 313 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 FAM71E1Q6IPT2 247 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCARB1-210ENST00000545493 SH3GL2Q99962 352 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 SHCBP1LQ9BZQ2 653 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 EXO1Q9UQ84 846 aaKnown RBP19.24■□□□□ 0.67
SCARB1-210ENST00000545493 WIF1Q9Y5W5 379 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 HIVEP1P15822 2718 aa19.24■□□□□ 0.67
SCARB1-210ENST00000545493 C17orf51A8MQB3 221 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 MYO1GB0I1T2 1018 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 PLOD3O60568 738 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 RSL1D1O76021 490 aaKnown RBP19.23■□□□□ 0.67
SCARB1-210ENST00000545493 BMP5P22003 454 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 TIMP3P35625 211 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 ZNF155Q12901 538 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-210ENST00000545493 MYBPHQ13203 477 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 SNTB1Q13884 538 aaKnown RBP19.23■□□□□ 0.67
SCARB1-210ENST00000545493 TESK1Q15569 626 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 IMPG1Q17R60 797 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 NSUN5P2Q63ZY6 315 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 TRIM46Q7Z4K8 759 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 TMEM200AQ86VY9 491 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 C4orf33Q8N1A6 199 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 OR4N2Q8NGD1 307 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 RDH11Q8TC12 318 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 ABTB1Q969K4 478 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-210ENST00000545493 ADOQ96SZ5 270 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 L2HGDHQ9H9P8 463 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 MYNNQ9NPC7 610 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 OXSMQ9NWU1 459 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 SENP1Q9P0U3 644 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 CCL27Q9Y4X3 112 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 PTGDR2Q9Y5Y4 395 aa19.23■□□□□ 0.67
SCARB1-210ENST00000545493 DOCK7Q96N67 2140 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 ABCB7O75027 752 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 REM1O75628 298 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 PSMG1O95456 288 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 JUNP05412 331 aaKnown RBP19.22■□□□□ 0.67
SCARB1-210ENST00000545493 MC3RP41968 323 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 ASCL1P50553 236 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 NCBP2P52298 156 aaKnown RBP eCLIP19.22■□□□□ 0.671e-7■□□□□ 9.7
SCARB1-210ENST00000545493 NAA20P61599 178 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 C2orf80Q0P641 193 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 TMEM107Q6UX40 140 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 EFHD2Q96C19 240 aaPredicted RBP19.22■□□□□ 0.67
SCARB1-210ENST00000545493 TMCO6Q96DC7 493 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 BBS4Q96RK4 519 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 TRIB1Q96RU8 372 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 STMN4Q9H169 189 aaPredicted RBP19.22■□□□□ 0.67
SCARB1-210ENST00000545493 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 FBXL2Q9UKC9 423 aa19.22■□□□□ 0.67
SCARB1-210ENST00000545493 MBD3L4A6NDZ8 208 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-210ENST00000545493 MBD3L3A6NE82 208 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-210ENST00000545493 MBD3L5A6NJ08 208 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-210ENST00000545493 CD8B2A6NJW9 211 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 H3BQF6 201 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 COPEO14579 308 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 DVL2O14641 736 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 CRCPO75575 148 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 IL12BP29460 328 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 GAS1P54826 345 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 PSG6Q00889 435 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 PCLAFQ15004 111 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 LIPMQ5VYY2 423 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 CLEC6AQ6EIG7 209 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 ARSKQ6UWY0 536 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 LARP4Q71RC2 724 aaKnown RBP eCLIP19.21■□□□□ 0.67
SCARB1-210ENST00000545493 PLCZ1Q86YW0 608 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 CCDC63Q8NA47 563 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 MBD3L2Q8NHZ7 208 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-210ENST00000545493 GLIPR2Q9H4G4 154 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 MIEF1Q9NQG6 463 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 GRID1Q9ULK0 1009 aa19.21■□□□□ 0.67
SCARB1-210ENST00000545493 A0A087WV62 115 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 COQ9O75208 318 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 ACTL6AO96019 429 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 UROSP10746 265 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 KRT4P19013 534 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 PRPH2P23942 346 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 TACR1P25103 407 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 MPIP34949 423 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 CCT5P48643 541 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 GFRA1P56159 465 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 PSPHP78330 225 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 SLC18A2Q05940 514 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 EFR3AQ14156 821 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 KIAA0040Q15053 153 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 FBXL19-AS1Q494R0 122 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 CFAP157Q5JU67 520 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 NOXRED1Q6NXP6 359 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 IKBIPQ70UQ0 350 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 SLC44A2Q8IWA5 706 aaPredicted RBP19.2■□□□□ 0.66
SCARB1-210ENST00000545493 ZZZ3Q8IYH5 903 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 C9orf106Q8NAJ2 232 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 OR14L1PQ8NHC6 308 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 FAM76AQ8TAV0 307 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 TRIM44Q96DX7 344 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms