RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 OVOL3O00110 214 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 REM1O75628 298 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 GRK2P25098 689 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 IVDP26440 423 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 MGAT2Q10469 447 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
COPS7A-220ENST00000544725 FNDC9Q8TBE3 224 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 ACTRT1Q8TDG2 376 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 GTPBP3Q969Y2 492 aaKnown RBP13.13□□□□□ -0.31
COPS7A-220ENST00000544725 SLC35A4Q96G79 324 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 LRRC1Q9BTT6 524 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 MAT2BQ9NZL9 334 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 ZNF639Q9UID6 485 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 PLLPQ9Y342 182 aa13.13□□□□□ -0.31
COPS7A-220ENST00000544725 UBXN8O00124 270 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 UGDHO60701 494 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 KERAO60938 352 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 SEMA3DO95025 777 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 ATP1B1P05026 303 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 FCGR2AP12318 317 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 DEKP35659 375 aaKnown RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 KRT20P35900 424 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 RAB10P61026 200 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 RPS3AP61247 264 aaKnown RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 EFR3AQ14156 821 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 PON3Q15166 354 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 GUSBP1Q15486 140 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 CPSF6Q16630 551 aaKnown RBP eCLIP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 RAET1LQ5VY80 246 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 WFDC8Q8IUA0 241 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 OR52R1Q8NGF1 315 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 ATOH8Q96SQ7 321 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 ADOQ96SZ5 270 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 GPR22Q99680 433 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 AMBRA1Q9C0C7 1298 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 DDX47Q9H0S4 455 aaKnown RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 STMN4Q9H169 189 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-220ENST00000544725 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
COPS7A-220ENST00000544725 H0YC42 278 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 LINC01387J3KSC0 135 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 SEC14L5O43304 696 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 PIAS1O75925 651 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 CBX7O95931 251 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 HK1P19367 917 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 CSNK2A2P19784 350 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 ACVR1BP36896 505 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 SUCLG1P53597 346 aaKnown RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 CLDN15P56746 228 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 PSPHP78330 225 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 FASTKD3Q14CZ7 662 aaKnown RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 SLC48A1Q6P1K1 146 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 ISCA2Q86U28 154 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 OR6K3Q8NGY3 331 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 CDKL2Q92772 493 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 OR10A4Q9H209 315 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 NMRAL1Q9HBL8 299 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 SMYD2Q9NRG4 433 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 PLSCR4Q9NRQ2 329 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
COPS7A-220ENST00000544725 GPR55Q9Y2T6 319 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-220ENST00000544725 CR1P17927 2039 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 C1orf226A1L170 272 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 GUCY1B2O75343 617 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 ERAL1O75616 437 aaKnown RBP13.1□□□□□ -0.31
COPS7A-220ENST00000544725 KLK1P06870 262 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 IL12BP29460 328 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 EMDP50402 254 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 GPX6P59796 221 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
COPS7A-220ENST00000544725 KRTAP24-1Q3LI83 254 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 TRMT12Q53H54 448 aaKnown RBP13.1□□□□□ -0.31
COPS7A-220ENST00000544725 CCNYL2Q5T2Q4 361 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 RAPH1Q70E73 1250 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPS7A-220ENST00000544725 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 RBBP8Q99708 897 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 CPNE1Q99829 537 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
COPS7A-220ENST00000544725 ACTR6Q9GZN1 396 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 PPP4R1LQ9P1A2 415 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 ADAM29Q9UKF5 820 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 CES1P1Q9UKY3 287 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 PSME2Q9UL46 239 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms