RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 DDA1Q9BW61 102 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 IFT27Q9BW83 186 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 MRPL4Q9BYD3 311 aaKnown RBP4.92□□□□□ -1.62
SNHG1-218ENST00000541615 ALOXE3Q9BYJ1 711 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 WWTR1Q9GZV5 400 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 HAPLN2Q9GZV7 340 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 SLITRK2Q9H156 845 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 DPAGT1Q9H3H5 408 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 MYNNQ9NPC7 610 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PNO1Q9NRX1 252 aaKnown RBP4.92□□□□□ -1.62
SNHG1-218ENST00000541615 GPR173Q9NS66 373 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 SNTG1Q9NSN8 517 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 TREX1Q9NSU2 369 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PNPOQ9NVS9 261 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 DDIT4Q9NX09 232 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 SOHLH2Q9NX45 425 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 RASL12Q9NYN1 266 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PLEK2Q9NYT0 353 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 SPG21Q9NZD8 308 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 MUTYHQ9UIF7 546 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 FKBPLQ9UIM3 349 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 NAGKQ9UJ70 344 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 EXOGQ9Y2C4 368 aaKnown RBP4.92□□□□□ -1.62
SNHG1-218ENST00000541615 GPR55Q9Y2T6 319 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-218ENST00000541615 ADAM18Q9Y3Q7 739 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PCDHGC4Q9Y5F7 938 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PCDHGA6Q9Y5G7 932 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
SNHG1-218ENST00000541615 DDX60Q8IY21 1712 aaKnown RBP4.92□□□□□ -1.62
SNHG1-218ENST00000541615 ROBO3Q96MS0 1386 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CCDC195A0A1B0GUA6 201 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 TCRBV9S1A1TA0A576 114 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 TCRBV7S2A1N4TA0A589 114 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GSAPA4D1B5 854 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 OR14I1A6ND48 311 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 DUXAA6NLW8 204 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FIGNL2A6NMB9 653 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 COLCA2A8K830 154 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FAM171A2A8MVW0 826 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ANHXE9PGG2 379 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 NPIPA7E9PJI5 369 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 TLR4O00206 839 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 LGALS8O00214 317 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 PDXKO00764 312 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 DVL1O14640 695 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 UBDO15205 165 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CHADO15335 359 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 PLA2G10O15496 165 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 OGG1O15527 345 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 PPIHO43447 177 aaKnown RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 OR2T1O43869 369 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SLC19A2O60779 497 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FAM20BO75063 409 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ATP6AP2O75787 350 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ZBTB7AO95365 584 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SGPL1O95470 568 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 C6orf47O95873 294 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CYBBP04839 570 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ADRB2P07550 413 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 OR52Z1P0C646 297 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FAM157BP0CG42 384 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 NPIPA8P0DM63 369 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CD8BP10966 210 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FCER1AP12319 257 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GABRA1P14867 456 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ZNF44P15621 663 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 IL1RNP18510 177 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 PTNP21246 168 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ITPKAP23677 461 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GADD45AP24522 165 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 APEX1P27695 318 aaKnown RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 NDUFS1P28331 727 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 HTR1EP28566 365 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SLC6A1P30531 599 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SSTR1P30872 391 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CD68P34810 354 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SLC11A1P49279 550 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GPR15P49685 360 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CLDN8P56748 225 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 TAS2R39P59534 338 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 RAB1AP62820 205 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 HSD11B2P80365 405 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 RPL19P84098 196 aaKnown RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SEMA5AQ13591 1074 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 SERTAD2Q14140 314 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GPR176Q14439 515 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FAM189A2Q15884 450 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 BSXQ3C1V8 233 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 CRTC2Q53ET0 693 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ACTBL2Q562R1 376 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 ZRANB3Q5FWF4 1079 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 C3orf38Q5JPI3 329 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 GLRA4Q5JXX5 417 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 FAM26FQ5R3K3 315 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 C9orf135Q5VTT2 229 aa4.91□□□□□ -1.62
SNHG1-218ENST00000541615 TDRD10Q5VZ19 366 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms