RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ALPPL2P10696 532 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 GABRA5P31644 462 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 CDK3Q00526 305 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 P2RY14Q15391 338 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 CEBPEQ15744 281 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 SPDYE7PQ495Y7 208 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 YIF1BQ5BJH7 314 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 GRASPQ7Z6J2 395 aaPredicted RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 VWA5B2Q8N398 1253 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ZC3HAV1LQ96H79 300 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 YIPF4Q9BSR8 244 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 PITHD1Q9GZP4 211 aaPredicted RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ANKRA2Q9H9E1 313 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 RANGRFQ9HD47 186 aaPredicted RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 SLC6A20Q9NP91 592 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 NTNG1Q9Y2I2 539 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ATG4BQ9Y4P1 393 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 GLOD5A6NK44 160 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 CLEC3AO75596 197 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 IGHA1P01876 353 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 HMGN2P05204 90 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 APEX1P27695 318 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 PEBP1P30086 187 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 RIN1Q13671 783 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 WSCD2Q2TBF2 565 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ARHGAP15Q53QZ3 475 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ARMC4Q5T2S8 1044 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 FAM131AQ6UXB0 335 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ZFP41Q8N8Y5 198 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ZNF681Q96N22 645 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 KCNJ15Q99712 375 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 C17orf62Q9BQA9 187 aa8.95□□□□□ -0.98
CNOT4-212ENST00000541284 ZCCHC3Q9NUD5 404 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 NUFIP1Q9UHK0 495 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 TNRC6BQ9UPQ9 1833 aaKnown RBP8.95□□□□□ -0.98
CNOT4-212ENST00000541284 EDDM13A0A1B0GTR0 161 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 OR1F1O43749 312 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 HNRNPA1P09651 372 aaKnown RBP eCLIP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 DRD2P14416 443 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 DRD3P35462 400 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SMSP52788 366 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ZNF234Q14588 700 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SLC36A4Q6YBV0 504 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TMEM91Q6ZNR0 172 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 LIX1LQ8IVB5 337 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ANKK1Q8NFD2 765 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SFXN5Q8TD22 340 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 MS4A6EQ96DS6 147 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TTYH2Q9BSA4 534 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 FNDC11Q9BVV2 318 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 PINK1Q9BXM7 581 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SLC22A4Q9H015 551 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 CNIH4Q9P003 139 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 EXOGQ9Y2C4 368 aaKnown RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 CACNA1IQ9P0X4 2223 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TRDV1A0A1B0GX56 115 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 CASC3O15234 703 aaKnown RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SURF4O15260 269 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 NR2F1P10589 423 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 KHKP50053 298 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 NCBP2P52298 156 aaKnown RBP eCLIP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 FXYD6P3P58550 94 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SCN1BQ07699 218 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ACSM1Q08AH1 577 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TSPAN31Q12999 210 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 C1DQ13901 141 aaKnown RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ELAVL3Q14576 367 aaKnown RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 GPAT3Q53EU6 434 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 RASSF6Q6ZTQ3 369 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 VRK2Q86Y07 508 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 BBS1Q8NFJ9 593 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ZFYVE19Q96K21 471 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 KCTD7Q96MP8 289 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 JAM3Q9BX67 310 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ZDHHC4Q9NPG8 344 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 MBNL1Q9NR56 388 aaKnown RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 LINC00854A0A1B0GVQ3 168 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 FABP12A6NFH5 140 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TFECO14948 347 aaPredicted RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 GUCY1B2O75343 617 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 NCR1O76036 304 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 TRIM23P36406 574 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 VIPR2P41587 438 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 MLLT3P42568 568 aaPredicted RBP8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SLC1A3P43003 542 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 MTNR1AP48039 350 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ARFIP1P53367 373 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 MADCAM1Q13477 382 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 FGL2Q14314 439 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 AGERQ15109 404 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 SNAPC1Q16533 368 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 ZFP69Q49AA0 526 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 KLHL22Q53GT1 634 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 C2orf27AQ580R0 203 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 C18orf63Q68DL7 685 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 PRR23CQ6ZRP0 262 aa8.94□□□□□ -0.98
CNOT4-212ENST00000541284 LRRTM4Q86VH4 590 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms