RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 HSPB3Q12988 150 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 C3AR1Q16581 482 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 MTFR2Q6P444 385 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 PAOXQ6QHF9 649 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 ZNF551Q7Z340 670 aaPredicted RBP12.02□□□□□ -0.49
LTBR-208ENST00000541005 CAMKMTQ7Z624 323 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 FJX1Q86VR8 437 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 TRIM42Q8IWZ5 723 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 RIMKLAQ8IXN7 391 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 NATD1Q8N6N6 113 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 TMBIM1Q969X1 311 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 TMEM41AQ96HV5 264 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 ATP6V1G3Q96LB4 118 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 RILPQ96NA2 401 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 LMF2Q9BU23 707 aaKnown RBP12.02□□□□□ -0.49
LTBR-208ENST00000541005 AKTIPQ9H8T0 292 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 MEAF6Q9HAF1 191 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 DDX18Q9NVP1 670 aaKnown RBP12.02□□□□□ -0.49
LTBR-208ENST00000541005 SH3BP4Q9P0V3 963 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 MAPRE3Q9UPY8 281 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
LTBR-208ENST00000541005 INTS1Q8N201 2190 aaKnown RBP12.02□□□□□ -0.49
LTBR-208ENST00000541005 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
LTBR-208ENST00000541005 TRGV8A0A0C4DH27 118 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 A0A1B0GTH9 108 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 OR14I1A6ND48 311 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 KLF11O14901 512 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 UGT2B11O75310 529 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 NME6O75414 186 aaPredicted RBP12.01□□□□□ -0.49
LTBR-208ENST00000541005 G6PDP11413 515 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 ABOP16442 354 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 PTGS2P35354 604 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 MAP3K8P41279 467 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 CLDN8P56748 225 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 OCRLQ01968 901 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 EFR3AQ14156 821 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 CYP27C1Q4G0S4 372 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 FNDC7Q5VTL7 733 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 BICRALQ6AI39 1079 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 OGFOD2Q6N063 350 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 SLC30A6Q6NXT4 461 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 TRILQ7L0X0 811 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 HDXQ7Z353 690 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 MGARPQ8TDB4 240 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 COQ8BQ96D53 544 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 COL21A1Q96P44 957 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 MS4A4EQ96PG1 132 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 ACKR4Q9NPB9 350 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 ATAD3AQ9NVI7 634 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 PNPOQ9NVS9 261 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 B4GALT7Q9UBV7 327 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 TINAGQ9UJW2 476 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 NAV2Q8IVL1 2488 aa12.01□□□□□ -0.49
LTBR-208ENST00000541005 HCFC1P51610 2035 aa12□□□□□ -0.49
LTBR-208ENST00000541005 GIMAP1-GIMAP5A0A087WTJ2 511 aa12□□□□□ -0.49
LTBR-208ENST00000541005 CCL21O00585 134 aa12□□□□□ -0.49
LTBR-208ENST00000541005 AQP7O14520 342 aa12□□□□□ -0.49
LTBR-208ENST00000541005 PRRG2O14669 202 aa12□□□□□ -0.49
LTBR-208ENST00000541005 SUSD5O60279 629 aa12□□□□□ -0.49
LTBR-208ENST00000541005 CDC40O60508 579 aaKnown RBP eCLIP12□□□□□ -0.49
LTBR-208ENST00000541005 HCN1O60741 890 aa12□□□□□ -0.49
LTBR-208ENST00000541005 RFPL3SP0C7P2 107 aa12□□□□□ -0.49
LTBR-208ENST00000541005 LAMP1P11279 417 aa12□□□□□ -0.49
LTBR-208ENST00000541005 ELAVL4P26378 380 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 PTGDSP41222 190 aa12□□□□□ -0.49
LTBR-208ENST00000541005 CDK9P50750 372 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 PNLIPRP2P54317 469 aa12□□□□□ -0.49
LTBR-208ENST00000541005 MANFP55145 182 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 MRPS22P82650 360 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 TTMPQ5BVD1 217 aa12□□□□□ -0.49
LTBR-208ENST00000541005 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 CPTPQ5TA50 214 aa12□□□□□ -0.49
LTBR-208ENST00000541005 TMEM198Q66K66 360 aa12□□□□□ -0.49
LTBR-208ENST00000541005 RPTNQ6XPR3 784 aa12□□□□□ -0.49
LTBR-208ENST00000541005 LARP4Q71RC2 724 aaKnown RBP eCLIP12□□□□□ -0.49
LTBR-208ENST00000541005 PACS2Q86VP3 889 aa12□□□□□ -0.49
LTBR-208ENST00000541005 DOLPP1Q86YN1 238 aa12□□□□□ -0.49
LTBR-208ENST00000541005 SLC44A2Q8IWA5 706 aaPredicted RBP12□□□□□ -0.49
LTBR-208ENST00000541005 KRTCAP2Q8N6L1 136 aa12□□□□□ -0.49
LTBR-208ENST00000541005 OR7A2PQ8NGA2 310 aa12□□□□□ -0.49
LTBR-208ENST00000541005 CEP70Q8NHQ1 597 aa12□□□□□ -0.49
LTBR-208ENST00000541005 PHF10Q8WUB8 498 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 GIMAP5Q96F15 307 aa12□□□□□ -0.49
LTBR-208ENST00000541005 CCDC120Q96HB5 630 aa12□□□□□ -0.49
LTBR-208ENST00000541005 NODALQ96S42 347 aa12□□□□□ -0.49
LTBR-208ENST00000541005 PRPF18Q99633 342 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 NUF2Q9BZD4 464 aa12□□□□□ -0.49
LTBR-208ENST00000541005 BHLHE41Q9C0J9 482 aaPredicted RBP12□□□□□ -0.49
LTBR-208ENST00000541005 DEFB127Q9H1M4 99 aa12□□□□□ -0.49
LTBR-208ENST00000541005 METTL7AQ9H8H3 244 aa12□□□□□ -0.49
LTBR-208ENST00000541005 MANSC1Q9H8J5 431 aa12□□□□□ -0.49
LTBR-208ENST00000541005 SIRT3Q9NTG7 399 aaPredicted RBP12□□□□□ -0.49
LTBR-208ENST00000541005 SUCOQ9UBS9 1254 aaKnown RBP12□□□□□ -0.49
LTBR-208ENST00000541005 C15orf41Q9Y2V0 281 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms