RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DNAJA4Q8WW22 397 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GTPBP3Q969Y2 492 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 SLC25A46Q96AG3 418 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 APIPQ96GX9 242 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 HYLS1Q96M11 299 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 C12orf57Q99622 126 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 MND1Q9BWT6 205 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 RBCK1Q9BYM8 510 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 POLR2J2Q9GZM3 115 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 ACTR6Q9GZN1 396 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CWH43Q9H720 699 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ANKRA2Q9H9E1 313 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 NEUROD4Q9HD90 331 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 FZD3Q9NPG1 666 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF624Q9P2J8 865 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 NFKBIL1Q9UBC1 381 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 MAP4K5Q9Y4K4 846 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CREBBPQ92793 2442 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ALPK2Q86TB3 2170 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF860A6NHJ4 632 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CPSF4LA6NMK7 179 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 MCIDASD6RGH6 385 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 H3BNC9 293 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 H7C0S8 307 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 LATO43561 262 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 OR10H3O60404 316 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 REM1O75628 298 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GBAP04062 536 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 SLC2A2P11168 524 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 PEPDP12955 493 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 LAMP2P13473 410 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 BMP7P18075 431 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ITGB7P26010 798 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CLDN20P56880 219 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 SELENOWP63302 87 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 UGT8Q16880 541 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 HKDC1Q2TB90 917 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 MEDAGQ5VYS4 303 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 SLC8B1Q6J4K2 584 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 NOXRED1Q6NXP6 359 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF761Q86XN6 746 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZBTB2Q8N680 514 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CLDN22Q8N7P3 220 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 C11orf65Q8NCR3 313 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 OR11H4Q8NGC9 324 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CEP76Q8TAP6 659 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PIH1D2Q8WWB5 315 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 KLHL6Q8WZ60 621 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 AP3S1Q92572 193 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 DNAJA3Q96EY1 480 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZC3HAV1LQ96H79 300 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 P2RY13Q9BPV8 354 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 RANBP3Q9H6Z4 567 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 RBFOX1Q9NWB1 397 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 NDUFB11Q9NX14 153 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 YARS2Q9Y2Z4 477 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 LSM2Q9Y333 95 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 PIAS3Q9Y6X2 628 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ATG2BQ96BY7 2078 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 NOTCH4Q99466 2003 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 LINC00862A6NCI5 91 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 WASHC1A8K0Z3 465 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 K7ERQ8 282 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 COCHO43405 550 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ORC5O43913 435 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GREM1O60565 184 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PLOD3O60568 738 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PRMT3O60678 531 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TOXO94900 526 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 KAT7O95251 611 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 LGI1O95970 557 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ASGR2P07307 311 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 JMJD7P0C870 316 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PRPH2P23942 346 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CHMP24386 653 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 HOXD9P28356 352 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 SDC2P34741 201 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CNR2P34972 360 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 IGFALSP35858 605 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PREPP48147 710 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CRYBA2P53672 197 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CRISP1P54107 249 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CAV3P56539 151 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 WNT3P56703 355 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZXDBP98169 803 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.95□□□□□ -1.62
PROM1-220ENST00000540805 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 CPTPQ5TA50 214 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZBTB37Q5TC79 503 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CYB5R2Q6BCY4 276 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF782Q6ZMW2 699 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 TPRG1Q6ZUI0 275 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 BTN2A1Q7KYR7 527 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PRSS42Q7Z5A4 293 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TSEN54Q7Z6J9 526 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 C1orf52Q8N6N3 182 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 CREB3L4Q8TEY5 395 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 MAL2Q969L2 176 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms