RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SLC25A14O95258 325 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 H2AFB2P0C5Z0 115 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 SRCP12931 536 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ACVR2AP27037 513 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 RAB8AP61006 207 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 RPS24P62847 133 aaKnown RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 PTGES3Q15185 160 aaKnown RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 CXorf57Q6NSI4 855 aaKnown RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 LINGO4Q6UY18 593 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ADGRF3Q8IZF5 1079 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 MS4A15Q8N5U1 240 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 DEFB124Q8NES8 71 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 OR9Q2Q8NGE9 314 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 OR52E4Q8NGH9 312 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 NEIL3Q8TAT5 605 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 SORCS1Q8WY21 1168 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 OR2M2Q96R28 347 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 DOHHQ9BU89 302 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 C1QTNF6Q9BXI9 259 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 TM6SF2Q9BZW4 377 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 CDCP1Q9H5V8 836 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 FBRSQ9HAH7 460 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 TMEM248Q9NWD8 314 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 SCP2D1Q9UJQ7 156 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 FZD4Q9ULV1 537 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 A0A0A6YYJ9 748 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 UBE2QL1A1L167 161 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 DISC1C4P0D8 188 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 LGALS8O00214 317 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 YKT6O15498 198 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 HRO43593 1189 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 TLX2O43763 284 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 LRP3O75074 770 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ENTPD6O75354 484 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 OR5F1O95221 314 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ALDOBP05062 364 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 HOXD4P09016 255 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 IL1RNP18510 177 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 CRISP1P54107 249 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 CASP9P55211 416 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 BTG1P62324 171 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 SERINC3Q13530 473 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 TAF1AQ15573 450 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 SLC14A2Q15849 920 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 MEDAGQ5VYS4 303 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 CDC73Q6P1J9 531 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ALKAL2Q6UX46 152 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 APH1BQ8WW43 257 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 UPRTQ96BW1 309 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ZBED6CLQ96FA7 236 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 TSNAXQ99598 290 aaKnown RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 CPPED1Q9BRF8 314 aaPredicted RBP8.22□□□□□ -1.09
DDB1-217ENST00000540166 EBPLQ9BY08 206 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 TPT1P8Q9HAU6 139 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 SLC25A37Q9NYZ2 338 aa8.22□□□□□ -1.09
DDB1-217ENST00000540166 FNDC1Q4ZHG4 1894 aaPredicted RBP8.21□□□□□ -1.09
DDB1-217ENST00000540166 EDDM13A0A1B0GTR0 161 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 MROH6A6NGR9 719 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 F8W036 122 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 PRNPP04156 253 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 HLA-DPB1P04440 258 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 IFNW1P05000 195 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 TNFRSF1BP20333 461 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 CSKP41240 450 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 PGFP49763 221 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 BCL2L1Q07817 233 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 ZNF273Q14593 569 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 METAP1DQ6UB28 335 aaPredicted RBP8.21□□□□□ -1.09
DDB1-217ENST00000540166 CLDN19Q8N6F1 224 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 OR6K2Q8NGY2 324 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 OR52P1PQ8NH57 321 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 ARRDC2Q8TBH0 407 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.09
DDB1-217ENST00000540166 CDCA4Q9BXL8 241 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 POLR2J3Q9H1A7 115 aaKnown RBP8.21□□□□□ -1.09
DDB1-217ENST00000540166 CSNK1G1Q9HCP0 422 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 NLE1Q9NVX2 485 aaPredicted RBP8.21□□□□□ -1.09
DDB1-217ENST00000540166 CYB5R1Q9UHQ9 305 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 SLC13A4Q9UKG4 626 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 SCML1Q9UN30 329 aa8.21□□□□□ -1.09
DDB1-217ENST00000540166 FXYD6-FXYD2A0A087WZ82 144 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 WASH3PC4AMC7 463 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 TRIM77I1YAP6 450 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 CLDN9O95484 217 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 EPOP01588 193 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ANXA5P08758 320 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 PRR35P0CG20 571 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 AKT2P31751 481 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 RORAP35398 523 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 PTGER3P43115 390 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 XKP51811 444 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 CTBP2P56545 445 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 KIAA1024LP59773 190 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 PLK5Q496M5 336 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 OXR1Q8N573 874 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 TMIEQ8NEW7 156 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 USP7Q93009 1102 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms