RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 F5P12259 2224 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 HOXB2P14652 356 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 GSTM3P21266 225 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ETV6P41212 452 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 CD97P48960 835 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 PPP5CP53041 499 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 GAS1P54826 345 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 PRR5P85299 388 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TNFRSF17Q02223 184 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ZNF91Q05481 1191 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TGM3Q08188 693 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 PIN1Q13526 163 aaPredicted RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 LASP1Q14847 261 aaKnown RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 KIR2DS3Q14952 304 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 SSX1Q16384 188 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ST3GAL2Q16842 350 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ZNF750Q32MQ0 723 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TPRG1LQ5T0D9 272 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TMEM107Q6UX40 140 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 OLIG3Q7RTU3 272 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 WDR53Q7Z5U6 358 aaPredicted RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 ZER1Q7Z7L7 766 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ASPGQ86U10 573 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 FAM26EQ8N5C1 309 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 NUP43Q8NFH3 380 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 OR4K5Q8NGD3 323 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 CHD6Q8TD26 2715 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 GANCQ8TET4 914 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 DIO2Q92813 273 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ELP4Q96EB1 424 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 WDR92Q96MX6 357 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 OPALINQ96PE5 141 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TRNT1Q96Q11 434 aaKnown RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 MGLLQ99685 303 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 MACROD1Q9BQ69 325 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 FNDC11Q9BVV2 318 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 CDADC1Q9BWV3 514 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ROGDIQ9GZN7 287 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 OR51E2Q9H255 320 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 C3orf14Q9HBI5 128 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 ZBTB20Q9HC78 741 aaPredicted RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 HHATLQ9HCP6 504 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 GIMAP4Q9NUV9 329 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TAS2R16Q9NYV7 291 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 CALML5Q9NZT1 146 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 FBXW2Q9UKT8 454 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 LIPT1Q9Y234 373 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 RPL36Q9Y3U8 105 aaKnown RBP8.67□□□□□ -1.02
DDB1-211ENST00000538280 CHST2Q9Y4C5 530 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 KCNE3Q9Y6H6 103 aa8.67□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3DA0A087WVF3 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3IA0A087WXS9 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3EA0A087X179 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3KA0A087X1G2 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 ISPDA4D126 451 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3FA6NER0 549 aaPredicted RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 POM121BA6NF01 834 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 AGAP5A6NIR3 686 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 GLOD5A6NK44 160 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 ISM1B1AKI9 464 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3LB9A6J9 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 ARHGAP33O14559 1287 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 CSO75390 466 aaKnown RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 ERAL1O75616 437 aaKnown RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 SOX14O95416 240 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 KLF8O95600 359 aaPredicted RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 EGFP01133 1207 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 STATHP02808 62 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 ALPPP05187 535 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 SCG5P05408 212 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3HP0C7X1 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 ACADMP11310 421 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 MAT2AP31153 395 aaKnown RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 PRKAR1BP31321 381 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 CTHP32929 405 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 MPIP34949 423 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 MC3RP41968 323 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 PCYT1AP49585 367 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 PSMD7P51665 324 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 RAB8AP61006 207 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 RELAQ04206 551 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 PRKCDQ05655 676 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 RGS1Q08116 209 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TARDBPQ13148 414 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDB1-211ENST00000538280 ATP1A4Q13733 1029 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TSTQ16762 297 aaKnown RBP8.66□□□□□ -1.02
DDB1-211ENST00000538280 TIMM50Q3ZCQ8 353 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3GQ6DHY5 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3CQ6IPX1 549 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 SDE2Q6IQ49 451 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 CDC73Q6P1J9 531 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 FBXO42Q6P3S6 717 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 CASP12Q6UXS9 341 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 GDPGP1Q6ZNW5 385 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 Q6ZS52 159 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 IQCHQ86VS3 1027 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 KIF18BQ86Y91 864 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 CCDC116Q8IYX3 515 aa8.66□□□□□ -1.02
DDB1-211ENST00000538280 TBC1D3Q8IZP1 549 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms