RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CCDC163A0A0D9SF12 145 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 GJE1A6NN92 205 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 TMEM225BP0DP42 221 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 PYCR1P32322 319 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 HOXC5Q00444 222 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 EIF4HQ15056 248 aaKnown RBP10.62□□□□□ -0.71
LINC00346-201ENST00000538077 FBXO43Q4G163 708 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF789Q5FWF6 425 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 FAM78AQ5JUQ0 283 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 CNIH4Q9P003 139 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 KLHL9Q9P2J3 617 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 SCP2D1Q9UJQ7 156 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 SIT1Q9Y3P8 196 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 DRD2P14416 443 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 NDUFV2P19404 249 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 NR4A2P43354 598 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 TCTE1Q5JU00 501 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 SLC18B1Q6NT16 456 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 UNC5DQ6UXZ4 953 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 SCD5Q86SK9 330 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 C3orf58Q8NDZ4 430 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 STOML3Q8TAV4 291 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 TRIB3Q96RU7 358 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 CDCA3Q99618 268 aaPredicted RBP10.62□□□□□ -0.71
LINC00346-201ENST00000538077 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 SLC46A2Q9BY10 475 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 NELFAQ9H3P2 528 aa10.62□□□□□ -0.71
LINC00346-201ENST00000538077 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
LINC00346-201ENST00000538077 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 NUDT21O43809 227 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 EEDO75530 441 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 BCAS2O75934 225 aaPredicted RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 C8BP07358 591 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 RAC2P15153 192 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF12P17014 697 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 EMP2P54851 167 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 SH3BP2P78314 561 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PNCKQ6P2M8 343 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 HORMAD2Q8N7B1 307 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 GPR26Q8NDV2 337 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 NANOS1Q8WY41 292 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 SAMD8Q96LT4 415 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 RNF38Q9H0F5 515 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 IGSF5Q9NSI5 407 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ST14Q9Y5Y6 855 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 M0QZQ0 153 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ATF6P18850 670 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 GCH1P30793 250 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 RPS5P46782 204 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ARSFP54793 590 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ACY1Q03154 408 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 VMACQ2NL98 169 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ZBED5Q49AG3 693 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PIP5KL1Q5T9C9 394 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ATG9BQ674R7 924 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ACVR1CQ8NER5 493 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 OR8J3Q8NGG0 315 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 C7orf34Q96L11 122 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 KLF16Q9BXK1 252 aaPredicted RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 TWSG1Q9GZX9 223 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 KCNIP1Q9NZI2 227 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 G3V3Y1 287 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 SLC19A2O60779 497 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 XCR1P46094 333 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 OR1D4P47884 311 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PTPRRQ15256 657 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 FAM43BQ6ZT52 329 aaPredicted RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 MAMDC2Q7Z304 686 aaPredicted RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 NETO1Q8TDF5 533 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 LRR1Q96L50 414 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 RETREG1Q9H6L5 497 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ZDHHC7Q9NXF8 308 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 GPR83Q9NYM4 423 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ADAMTS6Q9UKP5 1117 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 LOC102723532A0A0G2JNH3 316 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF623O75123 536 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PPM1BO75688 479 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 STSP08842 583 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ATP6AP1Q15904 470 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 C1orf220Q5T0J3 134 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 MRPL10Q7Z7H8 261 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF619Q8N2I2 560 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 RFT1Q96AA3 541 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 FUBP1Q96AE4 644 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 C12orf43Q96C57 262 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 GPR37L1O60883 481 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 HTR6P50406 440 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 SLC35F2Q8IXU6 374 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 SLC39A11Q8N1S5 342 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 KLHL15Q96M94 604 aa10.61□□□□□ -0.71
LINC00346-201ENST00000538077 PELOQ9BRX2 385 aaKnown RBP10.61□□□□□ -0.71
LINC00346-201ENST00000538077 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms