RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 FNDC11Q9BVV2 318 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 LYRM4Q9HD34 91 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 GIN1Q9NXP7 522 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 TAS2R16Q9NYV7 291 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 SLC9A8Q9Y2E8 581 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 CHST2Q9Y4C5 530 aa16.34■□□□□ 0.21
SNX17-210ENST00000537606 MED26O95402 600 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CNR2P34972 360 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CSNK1EP49674 416 aaKnown RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 RELAQ04206 551 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 TARDBPQ13148 414 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNX17-210ENST00000537606 GNA13Q14344 377 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 PODNL1Q6PEZ8 512 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 MCATQ8IVS2 390 aaKnown RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 OR2L13Q8N349 312 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 SLC38A3Q99624 504 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CAPN10Q9HC96 672 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 MUC3AQ02505 3323 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 A0A0A6YYC8 382 aaPredicted RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 I3L1I5 382 aaPredicted RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 ALPPP05187 535 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 ADRA2AP08913 450 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 LIPAP38571 399 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 AVPR1BP47901 424 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CRISP1P54107 249 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 TMED1Q13445 227 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 EXOSC7Q15024 291 aaKnown RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 FAM214AQ32MH5 1076 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CLIP4Q8N3C7 705 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
SNX17-210ENST00000537606 BTBD2Q9BX70 525 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 UCKL1Q9NWZ5 548 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 FTSJ1Q9UET6 329 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 KLHL3Q9UH77 587 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 ACAD8Q9UKU7 415 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 NTNG1Q9Y2I2 539 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 SPACA6W5XKT8 324 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 VPS13AQ96RL7 3174 aa16.33■□□□□ 0.2
SNX17-210ENST00000537606 OR2W5A6NFC9 320 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 A8MVJ9 347 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 CDC123O75794 336 aaPredicted RBP16.32■□□□□ 0.2
SNX17-210ENST00000537606 CT62P0C5K7 136 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 CD36P16671 472 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 TGFBR2P37173 567 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 RACK1P63244 317 aaKnown RBP16.32■□□□□ 0.2
SNX17-210ENST00000537606 MOGQ16653 247 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 ZNF628Q5EBL2 1059 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.32■□□□□ 0.2
SNX17-210ENST00000537606 DHRS1Q96LJ7 313 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 TRNT1Q96Q11 434 aaKnown RBP16.32■□□□□ 0.2
SNX17-210ENST00000537606 UCK2Q9BZX2 261 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 MAN2C1Q9NTJ4 1040 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 PCDH15Q96QU1 1955 aa16.32■□□□□ 0.2
SNX17-210ENST00000537606 CENPVL1A0A0U1RR11 272 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 SH3PXD2BA1X283 911 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 ASNA1O43681 348 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 GPR75O95800 540 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 ACP2P11117 423 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 BCKDHBP21953 392 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 OPRL1P41146 370 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 GFERP55789 205 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 STARD6P59095 220 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 ERV3-1Q14264 604 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 ZNF829Q3KNS6 432 aaPredicted RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 NKAIN2Q5VXU1 208 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 CDC73Q6P1J9 531 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 PGBD2Q6P3X8 592 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 DGAT2L6Q6ZPD8 337 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 RBM12BQ8IXT5 1001 aaKnown RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 SAMD14Q8IZD0 417 aaPredicted RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 B4GALNT2Q8NHY0 566 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 PIK3R3Q92569 461 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 IL4I1Q96RQ9 567 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 PSD2Q9BQI7 771 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 HCN3Q9P1Z3 774 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 REV1Q9UBZ9 1251 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 LIPT1Q9Y234 373 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 CPSF4LA6NMK7 179 aaKnown RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 ZAR1LA6NP61 321 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 H3BN98 237 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 M0R082 166 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 FAAHO00519 579 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 CDK1P06493 297 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 PROS1P07225 676 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 DCNP07585 359 aaKnown RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 C21orf59P57076 290 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 MAT1AQ00266 395 aaKnown RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 SLCO6A1Q86UG4 719 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 GKN2Q86XP6 184 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 METTL27Q8N6F8 245 aaPredicted RBP16.31■□□□□ 0.2
SNX17-210ENST00000537606 OR52P1PQ8NH57 321 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 TGM7Q96PF1 710 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 ANKHQ9HCJ1 492 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 CABIN1Q9Y6J0 2220 aa16.31■□□□□ 0.2
SNX17-210ENST00000537606 CHST10O43529 356 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms