RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	HGD	Q93099	445 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	TMCO6	Q96DC7	493 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	COL21A1	Q96P44	957 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	NODAL	Q96S42	347 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	ADO	Q96SZ5	270 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	EXO5	Q9H790	373 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	PLSCR2	Q9NRY7	297 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	ATAD3A	Q9NVI7	634 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551	NIN	Q8N4C6	2090 aa		21.31	■■□□□ 1
CHFR-215	ENST00000537551		A1L4Q6	167 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	ZG16	O60844	167 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	TRIM3	O75382	744 aa	Predicted RBP	21.3	■■□□□ 1
CHFR-215	ENST00000537551	RFPL3S	P0C7P2	107 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	LAMP1	P11279	417 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	PRPS1L1	P21108	318 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	FRK	P42685	505 aa	Predicted RBP	21.3	■■□□□ 1
CHFR-215	ENST00000537551	PRKAG1	P54619	331 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	MTFR2	Q6P444	385 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	MYO7B	Q6PIF6	2116 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	KRTCAP2	Q8N6L1	136 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	RAB3IL1	Q8TBN0	382 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	FAM57A	Q8TBR7	257 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	ATP6V1G3	Q96LB4	118 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	C3orf14	Q9HBI5	128 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	KLRF1	Q9NZS2	232 aa		21.3	■■□□□ 1
CHFR-215	ENST00000537551	GTF3C1	Q12789	2109 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	DIDO1	Q9BTC0	2240 aa	Known RBP	21.29	■■□□□ 1
CHFR-215	ENST00000537551		A0A1W2PRB8	838 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	OR6C70	A6NIJ9	312 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	LRRC3C	A6NJW4	275 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	ABCB7	O75027	752 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	CELA3A	P09093	270 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	IFI6	P09912	130 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	GDF1	P27539	372 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	CDK9	P50750	372 aa	Known RBP	21.29	■■□□□ 1
CHFR-215	ENST00000537551	PSG6	Q00889	435 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	EFR3A	Q14156	821 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	SLC30A6	Q6NXT4	461 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	LARP4	Q71RC2	724 aa	Known RBP eCLIP	21.29	■■□□□ 1
CHFR-215	ENST00000537551	WDR53	Q7Z5U6	358 aa	Predicted RBP	21.29	■■□□□ 1
CHFR-215	ENST00000537551	DOLPP1	Q86YN1	238 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	OR4N2	Q8NGD1	307 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	CEP70	Q8NHQ1	597 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	ZNF703	Q9H7S9	590 aa	Predicted RBP	21.29	■■□□□ 1
CHFR-215	ENST00000537551		Q9N2J8	555 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	EQTN	Q9NQ60	294 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	LIPG	Q9Y5X9	500 aa		21.29	■■□□□ 1
CHFR-215	ENST00000537551	FLNB	O75369	2602 aa	Known RBP	21.28	■■□□□ 1
CHFR-215	ENST00000537551	NPIPA2	E9PIF3	369 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	NPIPA3	F8WFD2	350 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	GNB5	O14775	395 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	SNN	O75324	88 aa	Predicted RBP	21.28	■■□□□ 1
CHFR-215	ENST00000537551	PSMG1	O95456	288 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	IGHG3	P01860	377 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	KIT	P10721	976 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	H2AFX	P16104	143 aa	Predicted RBP	21.28	■■□□□ 1
CHFR-215	ENST00000537551	LBP	P18428	481 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	MAN2A2	P49641	1150 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	CLDN8	P56748	225 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	TRIL	Q7L0X0	811 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	CD163	Q86VB7	1156 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	EID3	Q8N140	333 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	NATD1	Q8N6N6	113 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	NUP43	Q8NFH3	380 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	NUDT8	Q8WV74	236 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	EFHD2	Q96C19	240 aa	Predicted RBP	21.28	■■□□□ 1
CHFR-215	ENST00000537551	SLC35A4	Q96G79	324 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	CCDC120	Q96HB5	630 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	OSBPL11	Q9BXB4	747 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	MEAF6	Q9HAF1	191 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	QPCTL	Q9NXS2	382 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	ASIC5	Q9NY37	505 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	MARCO	Q9UEW3	520 aa	Predicted RBP	21.28	■■□□□ 1
CHFR-215	ENST00000537551	CBLC	Q9ULV8	474 aa		21.28	■■□□□ 1
CHFR-215	ENST00000537551	TRGV5	A0A0B4J1U4	118 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	C2orf72	A6NCS6	295 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	PRAMEF25	A6NGN4	478 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	EMC8	O43402	210 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	TSPAN2	O60636	221 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	ICOSLG	O75144	302 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	TRAPPC6A	O75865	159 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	PNLIPRP2	P54317	469 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	DIO3	P55073	304 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	MRPS22	P82650	360 aa	Known RBP	21.27	■■□□□ 1
CHFR-215	ENST00000537551	SNTA1	Q13424	505 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	GAB1	Q13480	694 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	MLC1	Q15049	377 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	TOMM20	Q15388	145 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	DECR1	Q16698	335 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	PGS1	Q32NB8	556 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	CYP27C1	Q4G0S4	372 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	TMEM81	Q6P7N7	255 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	C3P1	Q6ZMU1	363 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	OR1J4	Q8NGS1	313 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	COQ8B	Q96D53	544 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	TMEM41A	Q96HV5	264 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	GNRHR2	Q96P88	292 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	PHF12	Q96QT6	1004 aa		21.27	■■□□□ 1
CHFR-215	ENST00000537551	LMF2	Q9BU23	707 aa	Known RBP	21.27	■■□□□ 1
CHFR-215	ENST00000537551	PLEKHB1	Q9UF11	243 aa	Predicted RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms