RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 M0R129 80 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC7A4O43246 635 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CACNG3O60359 315 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 DPM1O60762 260 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ITGA10O75578 1167 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 APODP05090 189 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CHRM5P08912 532 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 GIPP09681 153 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 UGT2B7P16662 529 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 GIFP27352 417 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 GPX4P36969 197 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CDKN2CP42773 168 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 POU3F4P49335 361 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ARSDP51689 593 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF155Q12901 538 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 PLK5Q496M5 336 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TMEM31Q5JXX7 168 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 BEST4Q8NFU0 473 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TM9SF4Q92544 642 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SOSTQ9BQB4 213 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CA5BQ9Y2D0 317 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CITO14578 2027 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 GPR37O15354 613 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 OIP5O43482 229 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 OR1I1O60431 355 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 RHOCP08134 193 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SYPP08247 313 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CBSLP0DN79 551 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 AHCYP23526 432 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 VAMP1P23763 118 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CBSP35520 551 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SCNN1AP37088 669 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC3A1Q07837 685 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SERTAD2Q14140 314 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ST3GAL2Q16842 350 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TTLL9Q3SXZ7 439 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 USP39Q53GS9 565 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF789Q5FWF6 425 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 DOK6Q6PKX4 331 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 DPPA2Q7Z7J5 298 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 NAA40Q86UY6 237 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 DCUN1D3Q8IWE4 304 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 PHOSPHO1Q8TCT1 267 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 POPDC3Q9HBV1 291 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TREX1Q9NSU2 369 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TREM2Q9NZC2 230 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 RPS6KB2Q9UBS0 482 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TSPAN3O60637 253 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 HEXBP07686 556 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 PDZK1IP1Q13113 114 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ALKBH1Q13686 389 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ERV3-1Q14264 604 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 CFAP206Q8IYR0 622 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 NANOGP1Q8N7R0 232 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 OR5M9Q8NGP3 310 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ENKD1Q9H0I2 346 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 PIGMQ9H3S5 423 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC25A37Q9NYZ2 338 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 TLR4O00206 839 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 DCLK1O15075 740 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ARPC5O15511 151 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 LAP3P28838 519 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 CD96P40200 585 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.763e-17■■□□□ 11.7
CLSTN3-207ENST00000537408 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 MRNIPQ6NTE8 343 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 RPL13AP3Q6NVV1 102 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ARMC10Q8N2F6 343 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 CELF5Q8N6W0 485 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF527Q8NB42 609 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 TMEM185AQ8NFB2 350 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 VN1R2Q8NFZ6 395 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 PRRX2Q99811 253 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC38A1Q9H2H9 487 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 TCF7L1Q9HCS4 588 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 NCDNQ9UBB6 729 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 RAMP2O60895 175 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 RHOP08100 348 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 POU3F2P20265 443 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 HTR2AP28223 471 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 OR1E1P30953 314 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 STAT5AP42229 794 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 GCGRP47871 477 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 PITPNBP48739 271 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 CAV3P56539 151 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 VMACQ2NL98 169 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 TMEM44Q2T9K0 475 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC25A52Q3SY17 297 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 DHRS7BQ6IAN0 325 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 CILP2Q8IUL8 1156 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 SERPINA12Q8IW75 414 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF382Q96SR6 550 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 FXYD6Q9H0Q3 95 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 GFOD1Q9NXC2 390 aa10.28□□□□□ -0.76
CLSTN3-207ENST00000537408 DEC1Q9P2X7 70 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms