RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 TAGAPQ8N103 731 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TMEM156Q8N614 296 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 SFXN5Q8TD22 340 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 ASB15Q8WXK1 588 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 ADIPOR1Q96A54 375 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 HSPBAP1Q96EW2 488 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 THOC1Q96FV9 657 aaKnown RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 MARK4Q96L34 752 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 MS4A4EQ96PG1 132 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TMEM120AQ9BXJ8 343 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 ITPAQ9BY32 194 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 NTMQ9P121 344 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 DCTN4Q9UJW0 460 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 DTX4Q9Y2E6 619 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 FRG2CA6NGY1 282 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 A8MVJ9 347 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 UPK1AO00322 258 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 EMC8O43402 210 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 NADKO95544 446 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 IL6P05231 212 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PPICP45877 212 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PRR5P85299 388 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 OC90Q02509 493 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 ZNF155Q12901 538 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 SQLEQ14534 574 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 CYP4Z2PQ8N1L4 340 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 LCORQ96JN0 433 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 TEX37Q96LM6 180 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 VSTM2LQ96N03 204 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 RILPQ96NA2 401 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 NSRP1Q9H0G5 558 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDB1-207ENST00000535967 RABEP2Q9H5N1 569 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 FOLH1BQ9HBA9 442 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SIRT3Q9NTG7 399 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 ASF1BQ9NVP2 202 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 HPF1Q9NWY4 346 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 LRFN1Q9P244 771 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 BTNL2Q9UIR0 455 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PCDHGB4Q9UN71 923 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 PRSS51A0A1B0GVH4 220 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 FAM234BA2RU67 622 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 CAPN14A8MX76 684 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 TO15178 435 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 CFLARO15519 480 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 LILRA1O75019 489 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 ERN1O75460 977 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 CBX6O95503 412 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 C6orf47O95873 294 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PGRP06401 933 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 DRD5P21918 477 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 IL12AP29459 219 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 CD96P40200 585 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SOX3P41225 446 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 NR0B1P51843 470 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 POLR2JP52435 117 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 ARFIP2P53365 341 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 NME5P56597 212 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 WNT3P56703 355 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 OR1C1Q15619 314 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 ZNHIT3Q15649 155 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 BHLHB9Q6PI77 547 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 GOLM1Q8NBJ4 401 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 TMEM178AQ8NBL3 297 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SIMC1Q8NDZ2 872 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 OR56A1Q8NGH5 318 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 TMEM125Q96AQ2 219 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SPACA9Q96E40 222 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 SIGLEC12Q96PQ1 595 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 LMF2Q9BU23 707 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 NXF5Q9H1B4 397 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 ANKRA2Q9H9E1 313 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 LIN28AQ9H9Z2 209 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 PLA2G3Q9NZ20 509 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 GPR55Q9Y2T6 319 aaPredicted RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 CSAG2Q9Y5P2 127 aa11.69□□□□□ -0.54
DDB1-207ENST00000535967 COPG1Q9Y678 874 aaKnown RBP11.69□□□□□ -0.54
DDB1-207ENST00000535967 PKDREJQ9NTG1 2253 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 SCN2BO60939 215 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 SLC25A12O75746 678 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 NEURL1O76050 574 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 OR6B1O95007 311 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 KRT16P08779 473 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 NAGAP17050 411 aa11.68□□□□□ -0.54
DDB1-207ENST00000535967 EFNA1P20827 205 aaPredicted RBP11.68□□□□□ -0.54
DDB1-207ENST00000535967 LSP1P33241 339 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms