RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	AKAP10	O43572	662 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	ITGA10	O75578	1167 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	SCEL	O95171	688 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	GFAP	P14136	432 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	MAGEA12	P43365	314 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	NR0B1	P51843	470 aa	Known RBP	13.09	□□□□□ -0.31
POLE-208	ENST00000535934	ALDH6A1	Q02252	535 aa	Known RBP	13.09	□□□□□ -0.31
POLE-208	ENST00000535934	DDX39B	Q13838	428 aa	Known RBP	13.09	□□□□□ -0.31
POLE-208	ENST00000535934	CEACAM7	Q14002	265 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	TMEM35A	Q53FP2	167 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.09	□□□□□ -0.31
POLE-208	ENST00000535934	FAM219B	Q5XKK7	198 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	GRHL2	Q6ISB3	625 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	OR4N5	Q8IXE1	308 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	TMEM178A	Q8NBL3	297 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	VMP1	Q96GC9	406 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	GPR137	Q96N19	417 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	PHF12	Q96QT6	1004 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	DCUN1D5	Q9BTE7	237 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	ZNF717	Q9BY31	904 aa	Predicted RBP	13.09	□□□□□ -0.31
POLE-208	ENST00000535934	ADAP2	Q9NPF8	381 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	TINAG	Q9UJW2	476 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	PCDHGB4	Q9UN71	923 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	RAP2C	Q9Y3L5	183 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	PCDHGB5	Q9Y5G0	923 aa		13.09	□□□□□ -0.31
POLE-208	ENST00000535934	POLQ	O75417	2590 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	TCRBV3S1	A0A5B6	114 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	SYCE1L	A8MT33	242 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	CLDN25	C9JDP6	229 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	CCL21	O00585	134 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	PLPP1	O14494	284 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ZNF354A	O60765	605 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	SLC19A2	O60779	497 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	TRIM13	O60858	407 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	LYPLA1	O75608	230 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ETHE1	O95571	254 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	IFNA16	P05015	189 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	EPHA3	P29320	983 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	RFC3	P40938	356 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	CA7	P43166	264 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	HSF1	Q00613	529 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	SLAMF1	Q13291	335 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.08	□□□□□ -0.32	6e-10	■■■■■ 41.1
POLE-208	ENST00000535934	ELAVL1	Q15717	326 aa	Known RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	C3AR1	Q16581	482 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	AP5B1	Q2VPB7	878 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	LSM12	Q3MHD2	195 aa	Known RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	TECRL	Q5HYJ1	363 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	OR4C11	Q6IEV9	310 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	HACD2	Q6Y1H2	254 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	CHSY3	Q70JA7	882 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	GOLGA7	Q7Z5G4	137 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	FGD2	Q7Z6J4	655 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	C10orf107	Q8IVU9	208 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	HORMAD2	Q8N7B1	307 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ADAMTS18	Q8TE60	1221 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	UBE2E3	Q969T4	207 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ISL2	Q96A47	359 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	CCDC120	Q96HB5	630 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	RMND5A	Q9H871	391 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	DMRT3	Q9NQL9	472 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	DAPK2	Q9UIK4	370 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	EMCN	Q9ULC0	261 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	MRPS33	Q9Y291	106 aa	Known RBP	13.08	□□□□□ -0.32
POLE-208	ENST00000535934	ZNF835	Q9Y2P0	537 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	DNAJC13	O75165	2243 aa		13.08	□□□□□ -0.32
POLE-208	ENST00000535934	TRPC5OS	A6NMA1	111 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934		M0QX08	132 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	ASNA1	O43681	348 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	FGF17	O60258	216 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	EED	O75530	441 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PRKRA	O75569	313 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	OR2J2	O76002	312 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	ATE1	O95260	518 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PIK3CB	P42338	1070 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	SSR2	P43308	183 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PIK3CG	P48736	1102 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PER3	P56645	1201 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	RPS13	P62277	151 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	TGM3	Q08188	693 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	GTF2H2	Q13888	395 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	SPCS2	Q15005	226 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	ANKDD1A	Q495B1	522 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	SAMD4B	Q5PRF9	694 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	C18orf63	Q68DL7	685 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	GTF2H2C	Q6P1K8	395 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PAOX	Q6QHF9	649 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	DGAT2L6	Q6ZPD8	337 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	SULF2	Q8IWU5	870 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	ZNF786	Q8N393	782 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	SRFBP1	Q8NEF9	429 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	DOK4	Q8TEW6	326 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	UCN3	Q969E3	161 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	PHF21B	Q96EK2	531 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	CMTM7	Q96FZ5	175 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	NSUN5	Q96P11	429 aa	Known RBP	13.07	□□□□□ -0.32
POLE-208	ENST00000535934	CDK15	Q96Q40	435 aa		13.07	□□□□□ -0.32
POLE-208	ENST00000535934	ROGDI	Q9GZN7	287 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms